Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10]
18,860 sequences; 56,262,437 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq14534 82.4 9e-11
>seq14534
Length=9059
Score = 82.4 bits (90), Expect = 9e-11
Identities = 165/244 (68%), Gaps = 3/244 (1%)
Strand=Plus/Plus
Query 159550 ATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAG 159609
||||| || |||||||| || || || || || | | |||| |||| ||| ||
Sbjct 3268 ATGATCACCTATCCATCGACGTTCGGCGTCTTCGATGAAGATATCATTGAGATTTGTGAG 3327
Query 159610 ATTGTTCATGAGAATGGT---GGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAG 159666
|| ||||| | ||| | || || |||||||||||||| ||| | ||||| |||
Sbjct 3328 ATGATTCATAAATGTGGATCGGCGCAAGTCTATCTTGATGGTGCCAATATGAATGCGCAG 3387
Query 159667 GTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAG 159726
| |||||| || | || |||||| ||||| | ||||| || | || ||
Sbjct 3388 CTTGGTCTATGCCGTCCTGGGGATTATGGTAGTGATGTTTCGCATCTGAATCTTCACAAA 3447
Query 159727 ACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAA 159786
||||| || || || ||||| ||||||||||| || | || || || | || ||||
Sbjct 3448 ACATTTTGCATCCCTCATGGTGGTGGAGGTCCCGGTATGGGGCCGATAGCAGTGAAAAAA 3507
Query 159787 CATC 159790
||||
Sbjct 3508 CATC 3511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587912566929600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |