Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10]
18,860 sequences; 56,262,437 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq14534 87.8 2e-12
>seq14534
Length=9059
Score = 87.8 bits (96), Expect = 2e-12
Identities = 166/244 (68%), Gaps = 3/244 (1%)
Strand=Plus/Minus
Query 138172 GATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGA 138231
|||||||| || | || || || | || ||||||||||| ||||| || || || |
Sbjct 3511 GATGTTTTTTCACTGCTATCGGCCCCATACCGGGACCTCCACCACCATGAGGGATGCAAA 3452
Query 138232 ATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGAC 138291
|||| || || | ||| ||||| | ||||| |||||| || | || |||||
Sbjct 3451 ATGTTTTGTGAAGATTCAGATGCGAAACATCACTACCATAATCCCCAGGACGGCATAGAC 3392
Query 138292 CTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACC---ACCATTGTCATGAA 138348
| | ||| ||||| | ||| |||||||| ||||| || || | ||| | |||||
Sbjct 3391 CAAGCTGCGCATTCATATTGGCACCATCAAGATAGACTTGCGCCGATCCACATTTATGAA 3332
Query 138349 CGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408
|||| ||| |||| |||| | | || || || || ||||||||||| || |
Sbjct 3331 TCATCTCACAAATCTCAATGATATCTTCATCGAAGACGCCGAACGTCGATGGATAGGTGA 3272
Query 138409 TCAT 138412
||||
Sbjct 3271 TCAT 3268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578861901127200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |