Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcoptes_20scabiei_20[genbank_20GCA_5F000828355.1_202015-02-10] 18,860 sequences; 56,262,437 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq4298 91.5 2e-13 >seq4298 Length=5336 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| ||||||| | || || || ||| ||||||||||| |||||||||||||| Sbjct 1835 TTTGCTGAACGTCTTGTTGCGTTCGCTGCCGTCGAAGGAATCTTTTTCTCTGGCTCGTTT 1894 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 ||||| || ||||| ||||| || || || ||||| ||| ||| |||| || || Sbjct 1895 GCGGCTATCTTTTGGCTTAAAAAACGAGGACTGATGCCTGGCTTGACTTTCAGTAATGAA 1954 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 |||| || || || || || || ||| || ||||| Sbjct 1955 TTGATCTCGCGTGATGAAGGACTTCATTGTGATTTTGC 1992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548395485278400