Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 149 6e-31
>seq13173
Length=15772
Score = 149 bits (164), Expect = 6e-31
Identities = 402/609 (66%), Gaps = 12/609 (2%)
Strand=Plus/Minus
Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857
||| || |||||||| || |||| |||| | || ||| ||||| || || | |||
Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTAC 14551
Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917
|| | ||| || || | || || || || || || || || ||| || |
Sbjct 14550 GGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAAT 14491
Query 16918 AACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973
|| ||||| || ||||| || | ||||| | |||||||| || ||||
Sbjct 14490 AATGCGTTCACGACTGGGACGTTGAACC----AGATGCTGGAACATCAGCACGGCAAAAT 14435
Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033
||||||||| |||||||| | || | || || || || || | ||||||||
Sbjct 14434 CGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAA 14375
Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093
|| || ||||| |||||||| || | ||||| ||| |||||| || || ||||
Sbjct 14374 GACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGA 14315
Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGC-GTCTTTGTTACGAATCCATTTC 17152
||| ||||| || || | ||||| | | | || | ||||| | ||||||
Sbjct 14314 CGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGA-AGAAATCCAAGCG 14256
Query 17153 TGCACCCACTCGGCTTTTTGCTTTA-TGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211
| |||| || || || |||||| ||| | || || || || || || || | |
Sbjct 14255 AGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGC-ATAGTCTCAATCGCATTGAAAAGATA 14197
Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271
|| || || | || |||||| || ||||| |||| |||||||||||| || ||
Sbjct 14196 GTCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATG 14137
Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331
| |||||||||||| || || || || ||||| || || || || | ||| || || ||
Sbjct 14136 CACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTC 14077
Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
| | || ||||| | ||||||||||| || ||||| || |||||||| || ||
Sbjct 14076 CTGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGC 14017
Query 17392 CAATATATG 17400
||| | |||
Sbjct 14016 CAACACATG 14008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517324349256000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |