Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq13173 149 6e-31 >seq13173 Length=15772 Score = 149 bits (164), Expect = 6e-31 Identities = 402/609 (66%), Gaps = 12/609 (2%) Strand=Plus/Minus Query 16798 ATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTAC 16857 ||| || |||||||| || |||| |||| | || ||| ||||| || || | ||| Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTAC 14551 Query 16858 CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGC 16917 || | ||| || || | || || || || || || || || ||| || | Sbjct 14550 GGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAAT 14491 Query 16918 AACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAAT 16973 || ||||| || ||||| || | ||||| | |||||||| || |||| Sbjct 14490 AATGCGTTCACGACTGGGACGTTGAACC----AGATGCTGGAACATCAGCACGGCAAAAT 14435 Query 16974 CGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCT 17033 ||||||||| |||||||| | || | || || || || || | |||||||| Sbjct 14434 CGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAA 14375 Query 17034 TTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGA 17093 || || ||||| |||||||| || | ||||| ||| |||||| || || |||| Sbjct 14374 GACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGA 14315 Query 17094 CGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGC-GTCTTTGTTACGAATCCATTTC 17152 ||| ||||| || || | ||||| | | | || | ||||| | |||||| Sbjct 14314 CGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGA-AGAAATCCAAGCG 14256 Query 17153 TGCACCCACTCGGCTTTTTGCTTTA-TGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | |||| || || || |||||| ||| | || || || || || || || | | Sbjct 14255 AGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGC-ATAGTCTCAATCGCATTGAAAAGATA 14197 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || || || | || |||||| || ||||| |||| |||||||||||| || || Sbjct 14196 GTCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATG 14137 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 | |||||||||||| || || || || ||||| || || || || | ||| || || || Sbjct 14136 CACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTC 14077 Query 17332 CACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | | || ||||| | ||||||||||| || ||||| || |||||||| || || Sbjct 14076 CTGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGC 14017 Query 17392 CAATATATG 17400 ||| | ||| Sbjct 14016 CAACACATG 14008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517324349256000