Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq13173 96.9 4e-15 >seq13173 Length=15772 Score = 96.9 bits (106), Expect = 4e-15 Identities = 445/695 (64%), Gaps = 16/695 (2%) Strand=Plus/Minus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AAGTCGTA 16094 ||| || |||||||| || |||| | |||| | | |||||| || || || |||| || Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTT-TA 14552 Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154 | || | ||| | ||| | || | ||||| || || || || ||| |||||| || Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492 Query 16155 TGGCTCGTGTTTCA-GACGGTGTA--TGGTTTAGGTGTTTAAACATTAGACACG-CGAAG 16210 | ||| ||| ||| | | || || || | ||||| || |||| | || Sbjct 14491 TAATGCGT---TCACGACTGGGACGTTGAACCAGATGCTGGAACATCAG-CACGGCAAAA 14436 Query 16211 TCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270 ||||||||||| || ||||| | || | || || || || || | || ||||| Sbjct 14435 TCGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATA 14376 Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCA 16330 || || ||||| ||||| || || | ||| || || |||||| || || || Sbjct 14375 AGACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCG 14316 Query 16331 ACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTC 16390 || | |||||||| || | ||||| | | | || || | |||||| Sbjct 14315 ACGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCG 14256 Query 16391 TGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTC 16450 | |||| || || || | |||| ||| || || || || || || | | Sbjct 14255 AGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAG 14196 Query 16451 TCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGT 16510 || || ||| ||| |||||| || || || |||| ||||||||||| || || Sbjct 14195 TCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGC 14136 Query 16511 ATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC 16570 | |||||| ||||| || || || ||||| || || || ||||| | ||| || || ||| Sbjct 14135 ACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCC 14076 Query 16571 ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCC 16630 | ||| ||||| |||| || || || || || || || ||| || || || ||| Sbjct 14075 TGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCC 14016 Query 16631 A--ATATGTGCT-TAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687 | | ||| | | ||| | | | | |||| || || || ||||||| | | Sbjct 14015 AACACATGAGATATAAAGTGACGCTCATTGTCA---GTCAGGCGATTCCAATCTGTCATG 13959 Query 16688 TCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 || ||||| | |||||| ||||| |||||| || Sbjct 13958 TCCTTGGACAGATCCACCTCTTCGACCGTCCAGAA 13924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511195770344000