Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 96.9 4e-15
>seq13173
Length=15772
Score = 96.9 bits (106), Expect = 4e-15
Identities = 445/695 (64%), Gaps = 16/695 (2%)
Strand=Plus/Minus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT-AAGTCGTA 16094
||| || |||||||| || |||| | |||| | | |||||| || || || |||| ||
Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTT-TA 14552
Query 16095 CCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCGG 16154
| || | ||| | ||| | || | ||||| || || || || ||| |||||| ||
Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492
Query 16155 TGGCTCGTGTTTCA-GACGGTGTA--TGGTTTAGGTGTTTAAACATTAGACACG-CGAAG 16210
| ||| ||| ||| | | || || || | ||||| || |||| | ||
Sbjct 14491 TAATGCGT---TCACGACTGGGACGTTGAACCAGATGCTGGAACATCAG-CACGGCAAAA 14436
Query 16211 TCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATT 16270
||||||||||| || ||||| | || | || || || || || | || |||||
Sbjct 14435 TCGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATA 14376
Query 16271 TTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCA 16330
|| || ||||| ||||| || || | ||| || || |||||| || || ||
Sbjct 14375 AGACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCG 14316
Query 16331 ACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTC 16390
|| | |||||||| || | ||||| | | | || || | ||||||
Sbjct 14315 ACGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCG 14256
Query 16391 TGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATTTC 16450
| |||| || || || | |||| ||| || || || || || || | |
Sbjct 14255 AGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAG 14196
Query 16451 TCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGT 16510
|| || ||| ||| |||||| || || || |||| ||||||||||| || ||
Sbjct 14195 TCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGC 14136
Query 16511 ATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC 16570
| |||||| ||||| || || || ||||| || || || ||||| | ||| || || |||
Sbjct 14135 ACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCC 14076
Query 16571 ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCC 16630
| ||| ||||| |||| || || || || || || || ||| || || || |||
Sbjct 14075 TGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCC 14016
Query 16631 A--ATATGTGCT-TAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTTTAAA 16687
| | ||| | | ||| | | | | |||| || || || ||||||| | |
Sbjct 14015 AACACATGAGATATAAAGTGACGCTCATTGTCA---GTCAGGCGATTCCAATCTGTCATG 13959
Query 16688 TCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722
|| ||||| | |||||| ||||| |||||| ||
Sbjct 13958 TCCTTGGACAGATCCACCTCTTCGACCGTCCAGAA 13924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511195770344000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |