Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq5260 104 2e-17
>seq5260
Length=19401
Score = 104 bits (114), Expect = 2e-17
Identities = 258/386 (67%), Gaps = 12/386 (3%)
Strand=Plus/Minus
Query 101714 TCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGCAA 101773
||||| || || || | ||| || || ||| || ||| |||||||| |||||| |
Sbjct 12314 TCTCCCATGGTGTGCACAAAGTCGCCCGGCTTGAGGCCAGTCACATGAGCGATCATGTAG 12255
Query 101774 GTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTT 101833
|| | | | ||| ||||||||||| ||||| || || ||||| ||||| || |
Sbjct 12254 GTGAGCAACGCATACGAGGCAATGTTAAAGGGCACACCCAAACCCATGTCAGCGCTTCGT 12195
Query 101834 TGATACAGTTGACAGGAAAGCTTTCCA------TCACAGACATAAAATTGACTTAATACA 101887
||||| | |||||||| |||| ||| | | ||||| || || ||
Sbjct 12194 TGATATAACTGACAGGACAGCTCGCCACGATCCTGGGACACATAGAACTGGGCGAAGCAG 12135
Query 101888 TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATC 101947
|| |||||||||| | ||||||| || || || |||||| ||| |||| | |||
Sbjct 12134 TGGCAAGGCGGCAGCGCCATTTTTGGTATATCAATTGGATTCCAGGCAGACATAATAATC 12075
Query 101948 CTTCTATCTGTAGGGTTTGTT-TTTATAGTATCAATCAACTGTTTTAATTGGTCAACTCC 102006
| || ||||| | || ||||| ||| || ||||||| ||| | || || | ||
Sbjct 12074 CGTCGATCTG-ATGGATTGTTGCGTATGGTGTCAATCACCTGACGCAGCTGATCGATGCC 12016
Query 102007 TTCTCCTTTATAATCG-CGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACTGA 102064
| ||| |||| ||| || | ||| | ||||| ||| || || || | ||| |||
Sbjct 12015 CTTGCCTGTATAGTCGTCGTC--ACAGGTGCCATATTGTGCGCCAAAGTGGCGCCATTGA 11958
Query 102065 AATCCATACACAGGTCCAAGATCTCC 102090
|| ||||| || ||||| | ||| ||
Sbjct 11957 AAACCATAGACGGGTCCCAAATCGCC 11932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361100625984200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |