Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq17074 161 1e-34 >seq17074 Length=21176 Score = 161 bits (178), Expect = 1e-34 Identities = 221/306 (72%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 145606 AAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC 145665 || || ||||| | || |||| ||| | | || | || |||| ||||| || || | Sbjct 3918 AAATCCTCTATATTCTGCACCTGCCGCCGAATGTTTAGTTTGGGGAAGGGACGAGGCTTG 3977 Query 145666 CTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGG 145725 | ||||||| |||||| || || ||||| ||| | ||||| || | ||| ||| | Sbjct 3978 CGCTTCAGCTGCTCCTTCAGAGGATCAACGTGATTGCGATAGACATGGGTGTCGCCCGTG 4037 Query 145726 ACGTGGATGAAGTCCCCGGGCTCG-AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAG 145784 ||||| | || || || || ||| || ||||| | || |||| |||| | || ||||| Sbjct 4038 ACGTGCACAAACTCGCCCGG-TCGCAGACCCGTCACATGCGCGATCATGCACGTGAGCAG 4096 Query 145785 GGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAG 145844 | ||| || |||||||||||||| ||||| ||||| || | |||||| || || Sbjct 4097 CGCATAGGATGCAATGTTGAAGGGCACACCCAGACCCATATCAGCACTGCGCTGATAGAG 4156 Query 145845 CTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||||||||| ||||| || |||||| ||||||||| ||| |||||| |||||||| Sbjct 4157 CTGGCAGGATAGCTCGCCCTGCGCCACATAGAACTGGGCCAGACAGTGGCACGGCGGCAG 4216 Query 145905 GGCCAT 145910 ||||| Sbjct 4217 TGCCAT 4222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589824542168000