Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq20705 93.3 3e-14 >seq20705 Length=54059 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || ||| | || || | |||||||| ||||| ||| || ||||| | Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || |||| || ||| || ||||| || | || |||||| Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCA 6968 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 |||| | || |||||||| |||||||||||||||||| ||| || |||| ||||| Sbjct 6967 ACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAA 6908 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTG 25244 |||||||| || ||||| | ||| ||||| Sbjct 6907 CATTCAAAAAGAGTCTACATTGCACTTGGTG 6877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410625574758800