Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 318 6e-82
seq30232 122 9e-23
seq20705 107 2e-18
>seq13173
Length=15772
Score = 318 bits (352), Expect = 6e-82
Identities = 515/727 (71%), Gaps = 18/727 (2%)
Strand=Plus/Plus
Query 116655 AGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACT 116714
||||||| || || |||||||| ||||| |||||||| ||||||||||||| || || |
Sbjct 13910 AGGCCGAAGCATCTTTCTGGACGGTCGAAGAGGTGGATCTGTCCAAGGACATGACAGATT 13969
Query 116715 GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCG 116774
|| | ||| ||| ||||| ||||| || || || || ||| |||| || |||||||
Sbjct 13970 GGAATCGCCTGACTGACAATGAGCGTCACTTTATATCTCATGTGTTGGCATTCTTCGCCG 14029
Query 116775 CCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAGGAGGTGCAGGTG 116833
| || ||||| |||||||| |||||||| || || ||| || |||||||||||| |
Sbjct 14030 CATCAGATGGCATTGTCAACGAAAATCTGGTAGAACGCTTTAGC-CAGGAGGTGCAGATA 14088
Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATG 116893
||||||| || || || || ||||| || || ||||||||||||||||| |||||||||
Sbjct 14089 ACCGAGGCACGTTGTTTTTATGGCTTCCAAATTGCCATGGAGAACGTGCATTCGGAAATG 14148
Query 116894 TATTCGACCCTCATCGACAC----GTACGTG-CGCTCTTCGGAGGAGAAGCTCCGTTTGT 116948
|| || |||||||| |||||| ||| || | | || | | | |
Sbjct 14149 TACAGCGTACTTATCGACACCTATATACGTGATCCTCATC-AACGCGA----CTATCTTT 14203
Query 116949 TGAACGCCATCGAGACGATGCCGTGCGTCAAAGAG-AAGGCCGAGTGGGCGCTGCGC-TG 117006
| || || || ||||| ||||| || |||| | ||||| || ||||| || ||| ||
Sbjct 14204 TCAATGCGATTGAGACTATGCC-AGCAGTAAAGCGCAAGGCGGACTGGGCCCT-CGCTTG 14261
Query 117007 GATCGCCGGCAGAG-AGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065
||| | || || ||| || || || ||| | | || || || |||||||| |
Sbjct 14262 GAT-TTCTTCAAAGTCAGCCAATTTTGGTGAACGCATTATAGCTTTTGCCGCCGTCGAAG 14320
Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125
|| |||||||| ||||| ||||| | || |||||| | ||||| ||||| || ||||
Sbjct 14321 GCATCTTCTTTAGTGGCAGCTTCGCTTCAATCTTTTGGTTGAAGAAGCGCGGTCTTATGC 14380
Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185
|||| || || ||| || ||| | || || | ||||||||||| |||||||| ||||
Sbjct 14381 CCGGTCTTACCTTCTCAAATGAGTTAATTTCACGCGACGAGGGTCTACATTGCGATTTTG 14440
Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245
|| || ||||| ||||| |||| || || || || | ||| | | || |||
Sbjct 14441 CCGTGCTGATGTTCCAGCATCTGGTTCAACGTCCCAGTCGTGAACGCATTATTGAAATCA 14500
Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGC 117305
| | || || || | |||||| ||| |||||||| || || |||| || |
Sbjct 14501 TTTCAGATGCTGTAGTCATCGAACAGGAGTTCCTCACAGACGCTTTGCCCGTAAACTTAA 14560
Query 117306 TGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGC 117365
| || | |||||| || |||||| ||||||| || || |||||||| | ||||||
Sbjct 14561 TTGGCATGAATTGCAAACTGATGTCTGAATACATTGAATTTGTCGCCGATCGTCTGCTGG 14620
Query 117366 TCGAGCT 117372
| |||||
Sbjct 14621 TAGAGCT 14627
>seq30232
Length=15380
Score = 122 bits (134), Expect = 9e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| |||||||| |||| || || || |
Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | |||| || |||| ||||| || ||||| ||| | || |||
Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| |||||||| |||| ||||| || ||||||||||
Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 15151
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|||||||||||| |||| ||||| | |||
Sbjct 15150 ATCCAGAAGGAGTCCACTTTGCATTTGGTG 15121
Score = 118 bits (130), Expect = 1e-21
Identities = 166/233 (71%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || ||||| |||||||| |||| || || || |
Sbjct 15102 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15043
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | |||| || || | ||||| || ||||| ||| | || |||
Sbjct 15042 GATACCATTGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAG 14983
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| ||||| |||||||| |||| ||||| | ||||||||||
Sbjct 14982 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTTTGTCCGACTACAAC 14923
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922
|||||||||||| |||| |||| | ||| | || ||| | || |||| |||
Sbjct 14922 ATCCAGAAGGAGTCCACATTGCACTTGGTGCTCCGTTTGCGCGGTGGCGCCTT 14870
>seq20705
Length=54059
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || ||||| || || || |||||||| ||||||||| | || |||||| | |
Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| |||| | || |||| ||||||||||| || || | || ||
Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCA 6968
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||||| || |||| || |||||||| |||| || | ||||| || |||||||||
Sbjct 6967 ACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAA 6908
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||| || || ||| | || |||| | ||| | |||
Sbjct 6907 CATTCAAAAAGAGTCTACATTGCACTTGGTGCTCCGC 6871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 514998943792000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |