Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq20705 111 2e-19 >seq20705 Length=54059 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | ||||| ||||| ||||| || || || | ||| | ||| | Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||| ||| | ||| || ||||| || ||||| || || || || ||||| Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCA 6968 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || || ||||| || |||||||| || ||| |||| || | || || || Sbjct 6967 ACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAA 6908 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||||||||| || || ||||| ||||| | || | || |||||| Sbjct 6907 CATTCAAAAAGAGTCTACATTGCACTTGGTGCTCCGCCTCCGTGGTGGT 6859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755133042560000