Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq10079 143 5e-29
>seq10079
Length=19992
Score = 143 bits (158), Expect = 5e-29
Identities = 211/296 (71%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 189441 ATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTT 189500
||||| ||| |||||| | | || ||||| |||| | ||||| ||||||||| | |
Sbjct 12959 ATGATGATCTGTGGAACTCTGCGCAGTTGCAGCTGGTAAAGGAAGGCAAAATGCATGGAT 12900
Query 189501 TTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTT 189560
|| | |||||||||||||| || ||||| | |||||||| |||| ||||| ||
Sbjct 12899 TTCTGCGAATGTATTGGGCCAAAAAGATTTTGGAATGGACCGCCTCACCAGAAGAAGCAC 12840
Query 189561 TG-AGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGA 189619
|| |||| || || | | ||| | |||||| | || || ||||||||| ||
Sbjct 12839 TGGAGTT-TACAATATTGCTAAACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGC 12781
Query 189620 TACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCG 189679
||||| ||||| |||||||||||| | || | || || || ||||| ||| || |
Sbjct 12780 TACGTGGGTTGCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCT 12721
Query 189680 ATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 189735
|| |||||||||||| | |||||||| ||| || | | || ||||| |||||
Sbjct 12720 ATCTTTGGAAAGATACGCTATATGAACTATCAGGGGTGCAAACGCAAATTCGATGT 12665
Score = 84.2 bits (92), Expect = 4e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 189607 GGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTG 189666
||||||||| || ||||| ||||| |||||||||||| | || | || || || ||
Sbjct 12595 GGATCCTAATGGCTACGTGGGTTGCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTG 12536
Query 189667 GAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAA 189726
||| ||| || | || |||||||||||| | |||||||| ||| || | | || ||
Sbjct 12535 GAAGGAACGATCTATCTTTGGAAAGATACGCTATATGAACTATCAGGGGTGCAAACGCAA 12476
Query 189727 ATTTGATGT 189735
||| |||||
Sbjct 12475 ATTCGATGT 12467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922802133368000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |