Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 104 2e-17
>seq20705
Length=54059
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| | ||| || |||||||||||||||||||||| || || || ||||
Sbjct 6875 AGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCT 6934
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||||||||||||| ||| |||| || | ||||||||| || | || || || ||
Sbjct 6935 TCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCC 6994
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||| | | || ||||| | | | | || || || ||| |||| ||||||| |
Sbjct 6995 TGAATCT-TGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGT 7053
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||||| || | || || || ||||| ||||||
Sbjct 7054 CTTGCCCGTTAGGGTCTTAACGAAAATCTGCATT 7087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379185884679000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |