Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 407 2e-108
seq13173 226 4e-54
>seq20705
Length=54059
Score = 407 bits (450), Expect = 2e-108
Identities = 1218/1855 (66%), Gaps = 40/1855 (2%)
Strand=Plus/Plus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 62125
|| ||||| || || | || |||||||| ||||| || || || || |||| ||||||
Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426
Query 62126 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62185
||| || || ||||| ||| | || ||||| | || ||||| | || |||||
Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486
Query 62186 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTC 62245
|||||| || || || ||||| || |||||||||||||| | | || | |||||
Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGATTTAACGGAGATTTC 37546
Query 62246 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATGG 62301
||| | || || || || || | | | || |||| | | || ||||| |
Sbjct 37547 CCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATAG 37605
Query 62302 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62361
| |||| | || || ||||| || || |||| ||||| | || || |
Sbjct 37606 AACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTCA 37665
Query 62362 AAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGT 62421
|| ||| || || || | || |||||||||||||| ||||| || || | | ||||
Sbjct 37666 AATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTGT 37725
Query 62422 AAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62481
|||||||| || ||||| || | || |||||||| |||| ||||| ||||| ||||
Sbjct 37726 AAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATG 37785
Query 62482 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62541
| || ||||| ||||| | | ||| ||| | || |||| | |||| | || | ||
Sbjct 37786 CTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGTT 37844
Query 62542 TTAGATGT-TCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGA 62600
||| ||| | ||| | ||| | ||| | || | ||| |||| |
Sbjct 37845 TTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAAA 37904
Query 62601 ATACCGTTACTGGCGTACGAT-CCTACATATGTATCATA-TGGTCCT-TCCTTCTCAGCT 62657
||||| ||||| | | | | ||| ||||||| || || | | | | | ||| | ||
Sbjct 37905 ATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GCG 37961
Query 62658 AGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGA 62717
|| | ||||| ||||| | || || |||| || || || || |||| || ||||||
Sbjct 37962 AGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGA 38021
Query 62718 TCTTGTGCTTCCGGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAAT 62774
||| || ||| || | ||||| |||||| | | || || || ||
Sbjct 38022 AGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAAG 38078
Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834
|| ||||||||||| || ||||| | || || || || ||| ||| ||||| | |
Sbjct 38079 CCCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGA 38138
Query 62835 GGATAATAATTAATATCTATAATTTTATTGA-GATTTCTG--ACAATTACTTTGACCACA 62891
|||||| | || ||||| || ||||| || | | ||| || ||||| ||||| |||
Sbjct 38139 GGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-ACA 38195
Query 62892 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAACA 62948
|| |||| ||| ||| || || || | |||||||| || | || |
Sbjct 38196 TCTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATG 38255
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| || | || || || || | |||| || | | ||| | | || || || ||
Sbjct 38256 GAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACAT 38315
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
| ||| || || || || ||||| | |||||||||||||| || ||||| | |||
Sbjct 38316 AAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCT 38375
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
|| | || || |||||||||||||||| | ||||| || || || || ||| |
Sbjct 38376 TTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGA 38435
Query 63129 ACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCG 63187
| | || || ||| | |||| | | |||| || || | ||| ||| | |
Sbjct 38436 GATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTTT 38494
Query 63188 TTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGA 63247
|| ||||| ||||||||||||| | || | |||||||| || || |||||||| ||
Sbjct 38495 ATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATGA 38554
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63306
||| || | | | | | || || |||||||| ||||| || ||||| | ||| ||| |
Sbjct 38555 CCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAGA 38613
Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 63366
| ||||||| | | || |||||| || || || || ||||| | || | || | |
Sbjct 38614 AAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCAA 38673
Query 63367 TAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 63426
| || |||||||| ||||| || || || || | | ||||| || || ||||
Sbjct 38674 ACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTC 38733
Query 63427 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTG 63486
|||| || | || | ||| ||| ||| ||||||| | |||||| | | ||| ||||
Sbjct 38734 CCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTG 38793
Query 63487 ATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGAC 63546
| | ||||| || || |||| | || | |||||||| || || |
Sbjct 38794 AAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCC 38853
Query 63547 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTT 63606
| ||||| || || ||| || || | ||||||| ||| | | | | | || ||||
Sbjct 38854 CGATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTT 38913
Query 63607 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA---GTAG 63663
| || |||| | | ||| |||| |||||||| |||| ||| | ||| ||||
Sbjct 38914 CAATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAG 38973
Query 63664 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 63723
| |||| || | || || ||||| || || || || || ||||| | ||||
Sbjct 38974 CTGCCGCGAAAAGT---GTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGT 39030
Query 63724 ACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACA 63783
|||| |||| || | || ||||| ||| ||||| | || |||||||||||||
Sbjct 39031 ACGTTTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACA 39090
Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63843
| ||||| || | |||| ||||||| ||||| ||||| || || || ||| | |
Sbjct 39091 TATGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCG 39150
Query 63844 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
||||||| ||||||||||||||| |||||| || || ||||| ||| | || ||
Sbjct 39151 TTTTAAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205
>seq13173
Length=15772
Score = 226 bits (250), Expect = 4e-54
Identities = 472/701 (67%), Gaps = 3/701 (0%)
Strand=Plus/Minus
Query 33416 ATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 33475
||| ||||| ||||| || ||| ||||| || |||||||| || || | || ||
Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTAC 14551
Query 33476 TGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCT 33535
|| | ||| | || || || || ||||| ||| ||| |||| || || || |
Sbjct 14550 GGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAAT 14491
Query 33536 AACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCA 33595
|| | ||| ||| || | || | | ||| | ||||||| || ||||||||
Sbjct 14490 AATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGCA 14431
Query 33596 GTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCC 33655
|| ||||||||||| | |||||| || || || || || || |||||||| || ||
Sbjct 14430 ATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGACC 14371
Query 33656 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGC 33715
||||| || | |||||| || |||||||| || ||||||||| ||||| || ||
Sbjct 14370 GCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGGC 14311
Query 33716 AGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-TCCACTTTTGAGC 33772
||||| || |||| | || ||| || ||| || | | | | |||| | ||
Sbjct 14310 GGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGGC 14251
Query 33773 CCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttttt 33832
||| || ||||| ||||| ||||| || || || ||||| || |||||||
Sbjct 14250 CCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGCG 14191
Query 33833 ttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTT 33892
|| || | ||| | ||| || ||||| | | || |||||||||||||| | |||
Sbjct 14190 TTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGTT 14131
Query 33893 TTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACA 33952
|| ||||| || || || || || ||||| | |||||||| |||||||| || |
Sbjct 14130 CTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGCT 14071
Query 33953 AAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATAC 34012
||| |||||| | | |||||| || || || ||||| || || || || ||||| ||
Sbjct 14070 AAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACAC 14011
Query 34013 ATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGA 34072
||| |||||| | || | || || ||||||||| | || || || ||
Sbjct 14010 ATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGGA 13951
Query 34073 TATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
| |||||| ||||| || ||||| || ||||| || ||||
Sbjct 13950 CAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629548352976000
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