Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 374 8e-99
>seq20705
Length=54059
Score = 374 bits (414), Expect = 8e-99
Identities = 1195/1839 (65%), Gaps = 32/1839 (2%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
||||| || || | |||| |||| || | |||||||| || ||||||||||| |||
Sbjct 37341 TCAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATTCCTGTT 37400
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| ||||| ||||| ||||||||| || ||||||||| | || | || |
Sbjct 37401 TTAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCT 37460
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
| | | || | | || ||||||||||||||||| ||||| || || || ||||||
Sbjct 37461 GCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGCAGCCATT 37520
Query 36970 TCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCT 37029
| || | |||| || || ||||| || || || || | | | | | |
Sbjct 37521 TTTATTGTTGATTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGACGTGTTGA 37580
Query 37030 GGTA---AATCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCA 37086
|| | |||| | | ||||||||||||| | | | ||| ||||| |||||
Sbjct 37581 GGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTCTTCATGTCG 37640
Query 37087 TTATTCCACATATTTCTACTTATT--AGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144
| || ||| || || | || | | |||| | |||||| ||||||| || || |
Sbjct 37641 TCATCCCA--TAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACTACTTGGA 37698
Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204
| || |||||||| || | ||| || || ||||| || || || || | ||| ||||
Sbjct 37699 ATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAGGATTCAT 37758
Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264
|||||| | |||||| | || ||||| |||||||||||||| || || | ||| |
Sbjct 37759 TATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAAGAATTGC 37818
Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324
| || ||| | |||||| | |||| ||| |||||| |||||||||||||||||
Sbjct 37819 GAACGCCGTGTTTCTTAATTGACGTTTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAG 37878
Query 37325 TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCT 37384
| || |||||| ||||| |||| ||||||||||||| |||| | | |||||| |
Sbjct 37879 TTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGGCTGCCTTCATATGTTT 37938
Query 37385 CATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTG 37444
| || || | || || || |||||||| | || || || || |||||||||
Sbjct 37939 CGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTG 37998
Query 37445 TTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATA 37504
| |||||||| || |||| | ||| || ||||| ||| | | ||| | || ||
Sbjct 37999 TCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTA 38058
Query 37505 ATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTA--TT 37562
| || | |||| || || ||||||||||| || || || || | || |||| ||
Sbjct 38059 AGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGAC--GGTGCCTTAAGTT 38116
Query 37563 AGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTT 37622
||| | | ||| | |||||| | |||||||| |||||||| || | |||||
Sbjct 38117 CGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTT 38176
Query 37623 AACTAGTATTTTCGTAATTATTCTCAACTTGTCGAA--CATAAATACGTTATT----ATT 37676
| || || || | | |||| || | || | || | || || | |
Sbjct 38177 TGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGTCGTATTT---TTTTTCGGGAGT 38233
Query 37677 AACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACT 37736
||||| || | | | || || ||| || || ||||||| |||||| |
Sbjct 38234 GACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGA 38293
Query 37737 AAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATT 37796
| | | | ||| || ||||| | ||| || || |||| ||||| | || ||||||
Sbjct 38294 ATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATT 38353
Query 37797 GGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGC 37856
||| |||||| |||||||| | || ||||| || || || ||||| |||||
Sbjct 38354 ACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGA 38413
Query 37857 CTCGATAATAGATTTCCATAAACTTCTTGCTTTAA-CGATCGCTT-TAAtttttttCTTT 37914
||| || |||| ||| | | | ||||||| | ||| || | ||| |
Sbjct 38414 CTCAATTATAGCAAACCACAGAGATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCT- 38472
Query 37915 GTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGA 37974
||| |||| | ||| | ||| | ||| || | ||||| ||||| ||| || |||
Sbjct 38473 -GTTCATATTTGACATAGAGTTTATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGA 38531
Query 37975 CATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAA 38034
|||| ||| ||||| | ||||| || |||| ||| || || | |||||| | |
Sbjct 38532 CATTTATGTGGGCACATCAATGACCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGA 38591
Query 38035 TCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTC 38094
|| |||| |||||| ||| || | |||| || | || ||| || || || ||
Sbjct 38592 TCTGGTATCCATAAAGCATAGAAAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTT 38651
Query 38095 TTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATT 38154
||| ||||| || ||| || || | || | ||||| ||||||| |||||| | |
Sbjct 38652 TTTTTTAAGTCTAAAAATTCAAACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAG 38711
Query 38155 GCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTT 38214
|| || || | || |||||||||| | || ||| | | | ||| ||| | | ||||
Sbjct 38712 GCACCAGGACGCTTTCCACCTCCCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTT 38771
Query 38215 AACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCT 38274
| ||| || || | |||||| || | || || | || | || ||||||| |||||
Sbjct 38772 AGCATTGGCACCAAACCATTTGAAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCA 38831
Query 38275 CGTATATTACTTATCGACAAT-CCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG 38333
|| || | | | || || || |||||||| || ||| ||||| | ||||||||
Sbjct 38832 CGAAT-GCAGTGAACGTTTATCCCGATTCCACCAGCTGATTTGGATATCATTGCGCATTG 38890
Query 38334 TTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACT 38393
|| | | | |||||| ||||| || ||| || || | || | ||||||
Sbjct 38891 TTCGACGGATTTAAATATTCCTTCAATTGAATCAGCCACCATCGTAAGAAGAAAACACGA 38950
Query 38394 AGACATTTGAGGC---AATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAA 38450
|||| ||| ||| || || | | ||| || | ||| || || ||||| ||||
Sbjct 38951 CGACAGTTGCGGCCGATTTGTAGCTGCCGCG---AAAAGTGTTGGCGAAGCATGGGTGAA 39007
Query 38451 CCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAAT 38510
|| || || | | || || ||||| | | | |||| ||||| |||| || ||
Sbjct 39008 ATATCGCTCGGAAAGCAAGTTGTACGTTTCAACTGCCGCATCGATATCTTCGCCATGTAT 39067
Query 38511 ACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTT 38570
|| | | || | ||||| |||||| ||||| | ||| ||||| ||| ||
Sbjct 39068 TCCAATGGCCACACGCATTAACATATGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTT 39127
Query 38571 AAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATA 38609
| || ||| || ||| | ||||| | |||||||||
Sbjct 39128 CAATAAATATGAACGTTCAAGCGTTTTAAATCCAAAATA 39166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468324505648000
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