Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq20705 421 9e-113 seq13173 215 7e-51 >seq20705 Length=54059 Score = 421 bits (466), Expect = 9e-113 Identities = 1220/1853 (66%), Gaps = 36/1853 (2%) Strand=Plus/Plus Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 64918 || ||||| || || | || |||||||| ||||| || || || || |||| |||||| Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426 Query 64919 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 64978 ||| || || ||||| ||| | || ||||| | || ||||| | || ||||| Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486 Query 64979 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA-ATTT 65037 |||||| || || || ||||| || |||||||||||||| | | ||| ||| |||| Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545 Query 65038 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 65093 |||| | || || || || || | | | || |||| | | || ||||| Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604 Query 65094 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 65153 || |||| || || || ||||| || || |||| ||||| | || || Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664 Query 65154 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 65213 ||| ||| || || || |||| |||||||| ||||| ||||| || || | | ||| Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724 Query 65214 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 65273 ||||||||| || ||||| || | || |||||||| |||| ||||| ||||| ||| Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784 Query 65274 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCT 65333 || || ||||| ||||| | | ||| ||| | || |||| | |||| | || | | Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843 Query 65334 TTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 65392 |||| || | ||| | ||| | ||| | || |||| Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903 Query 65393 AATACCGTTACTGGCGTACGAT-CCTACATATGTATCGTA-TGGTCCT-TCCTTCTCAGC 65449 |||||| ||||| | | | | ||| ||||||| ||||| | | | | | ||| | || Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960 Query 65450 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 65509 || || ||||| ||||| | || || |||| || || ||||| |||| || ||||| Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020 Query 65510 ATCTTGTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAA 65566 | ||| || ||| || | ||||| |||||| | | || || || || Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAA 38077 Query 65567 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 65626 || ||||||||||| || ||||| | || || || || ||| ||| ||||| | Sbjct 38078 GCCCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAG 38137 Query 65627 AGGATAATAATTAATATCTATAATTTTATTGA-GATTTCTG--ACAATTACTTTGACCAC 65683 ||||||| | || ||||| || ||||| || | | ||| || ||||| ||||| || Sbjct 38138 AGGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-AC 38194 Query 65684 ATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTA---TTACAAACATGTTCAATGCAAC 65740 ||| |||| ||| ||| || || | || | |||||||| || | || | Sbjct 38195 ATCTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTAT 38254 Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800 || || | || ||||| || | |||| || | | ||| | | || || || || Sbjct 38255 GGAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACA 38314 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 | ||| || || || |||||||| | |||||||||||||| || ||||| | ||| Sbjct 38315 TAAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATC 38374 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920 || | || || |||||||||||||||| | ||||| || || || || ||| | Sbjct 38375 TTTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAG 38434 Query 65921 GACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATC 65979 | | || || ||| | |||| | | | || || || | ||| ||| | | Sbjct 38435 AGATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTT 38493 Query 65980 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 66039 || ||||| ||||||||||||| | || |||||||||| || || |||||||| | Sbjct 38494 TATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATG 38553 Query 66040 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 66099 |||| || | | | | | || || |||||||| ||||| || ||||| | ||| ||| Sbjct 38554 ACCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAG 38612 Query 66100 ATAA-ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 66158 | || ||||| || | || |||||| || || || || ||||| | || | || | Sbjct 38613 AAAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCA 38672 Query 66159 ATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 66218 | | || ||||||| ||||| || || || || | | ||||| || || ||| Sbjct 38673 AACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCT 38732 Query 66219 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 66278 ||||| || | || | ||| ||| ||| ||||||| | |||||| | | |||||| Sbjct 38733 CCCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTT 38792 Query 66279 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGA 66338 || || ||||| || || |||| | | || | |||||||| || || Sbjct 38793 GAAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATC 38852 Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398 || ||||| || || ||| || || | ||||||| ||| | | | | | || || Sbjct 38853 CCGATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCT 38912 Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458 || || |||| ||| ||| |||| |||||||| |||| ||| | ||| | || Sbjct 38913 TCAATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTA 38972 Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518 | || || | || || ||||| || || || || || ||||| | |||||| Sbjct 38973 GCTGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTAC 39032 Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578 || |||| || | || ||||| ||| ||||| | || |||||||||||||| Sbjct 39033 GTTTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATA 39092 Query 66579 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 66638 ||||| || | |||| | || || ||||| ||||| || || || ||| | ||| Sbjct 39093 TGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTT 39152 Query 66639 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691 ||||| ||||||||||||||| |||||| || || ||||| ||| | ||||| Sbjct 39153 TTAAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205 >seq13173 Length=15772 Score = 215 bits (238), Expect = 7e-51 Identities = 472/702 (67%), Gaps = 5/702 (1%) Strand=Plus/Minus Query 35992 ATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 36050 ||| ||||||||||| || ||| ||||| || |||||||| || || ||||||| Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552 Query 36051 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATA 36110 | || | ||| | || || || || ||||| || || || |||| || || | Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492 Query 36111 TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGC 36170 | | ||| ||| || | | | | ||| | ||||||| || ||||||| Sbjct 14491 TAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432 Query 36171 AGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 36230 | |||||||||||||| | |||||| || || || || || || |||||||| || | Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372 Query 36231 CACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTG 36290 | ||||| || | |||||| || || || || ||| |||||| || ||||| || | Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312 Query 36291 CCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATG-TATCCACTTTTGAG 36347 | ||||| || |||| | || ||| || ||| ||| | | | ||||| | | Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGG 14252 Query 36348 CCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttt 36407 |||| || ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 14251 CCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGC 14192 Query 36408 tttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGT 36467 || || | ||| | ||| || || || | | || |||||||||||||| | || Sbjct 14191 GTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGT 14132 Query 36468 TTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 36527 | || ||||| ||||| || || || ||||| | |||||||| ||||| || || | Sbjct 14131 TCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGC 14072 Query 36528 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 36587 ||| |||||| | | |||||| || || || || || || || || || ||||| | Sbjct 14071 TAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACA 14012 Query 36588 CATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 36647 |||| |||||| | || || || || ||||||||| | || || || | Sbjct 14011 CATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGG 13952 Query 36648 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 | | |||||| ||||| || ||||| || ||||| || |||| Sbjct 13951 ACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657891431128000