Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq20705 441 1e-118 seq13173 233 3e-56 >seq20705 Length=54059 Score = 441 bits (488), Expect = 1e-118 Identities = 1224/1851 (66%), Gaps = 32/1851 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAGAA 78797 || ||||| || || | || |||||||| ||||| || || || || |||| ||| || Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426 Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857 ||| || || ||||| ||| | || ||||| | || ||||| | || ||||| Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486 Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA-ATTT 78916 |||||| || || || ||||| || |||||||||||||| | | ||| ||| |||| Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545 Query 78917 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 78972 |||| | || || || || || | | | || |||| | | || ||||| Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604 Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032 || |||| || || || ||||| || || |||| ||||| | || || Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664 Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092 ||| ||| || || || |||| |||||||| ||||| ||||| || || | | ||| Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724 Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152 ||||||||| || || || || | ||||||||||| |||| ||||| ||||| ||| Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784 Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCT 79212 || || ||||| ||||| | | ||| ||| | || |||| | ||| | || | | Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGTT-TCTTAATTGACGT 37843 Query 79213 TTTA-GAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAG 79271 |||| | | | ||| ||||| | ||| | || |||||| | ||||| |||| Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903 Query 79272 AATACCGTTACTAGCGTATGAT-CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTA 79330 |||||| ||||| | | | | ||| |||||||| || || | | || || | Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGTGCGA 37962 Query 79331 ATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT 79390 || ||||| ||||| | ||||| |||| || || |||||||||| || || ||| Sbjct 37963 GCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAA 38022 Query 79391 CTTGTGCTTCTAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAATC 79447 ||| || ||| || | ||||| |||||| | | || || || || | Sbjct 38023 GAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAAGC 38079 Query 79448 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAG 79507 | ||||||||||| || ||||| | || || || || ||| ||| ||||| | || Sbjct 38080 CCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAG 38139 Query 79508 GATAATAATTAATATCTATAATTTTATTGA-GATTCCTG--ACTATTACTTTGACCACAT 79564 ||||| | || ||||| || ||||| || | | || || || || ||||| |||| Sbjct 38140 GATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-ACAT 38196 Query 79565 CCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---TTACAAACATGTTCAACGCGACAG 79621 | || | ||| ||| || || | || | |||||||| || | || | | Sbjct 38197 CTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATGG 38256 Query 79622 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGA 79681 | || | || ||||| || | |||| || | | ||| | | ||||| || || | Sbjct 38257 AAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATA 38316 Query 79682 GGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 79741 || || || ||||||||||| | |||||||||||||| || ||||| | ||| | Sbjct 38317 AATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTT 38376 Query 79742 TATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 79801 | | || || | |||||||||||||| | ||||| || || || || ||| | Sbjct 38377 TGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGAG 38436 Query 79802 CTCGAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860 | | || || ||| | || | | | | || || || | |||| ||| | | Sbjct 38437 ATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTTTA 38495 Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || ||||| |||||||||||||| | ||| |||||||||| | || |||||||| ||| Sbjct 38496 TCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATGAC 38555 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || || ||| | | | || || |||||||| ||||| || ||||| | ||| ||| || Sbjct 38556 CAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAGAA 38614 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||||| || | || ||||| || || || || ||||| | || | || | | Sbjct 38615 AAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAA 38674 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | || |||||||| ||||| || || || || | | || || || || ||||| Sbjct 38675 CACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCC 38734 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | || | ||| ||| ||| ||||||| | |||||| | | |||||| || Sbjct 38735 CTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTGA 38794 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219 || ||||| || || |||| | | || | |||||||| || || || Sbjct 38795 AGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCCC 38854 Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279 ||||| || || ||| || || | ||||||| ||| | | | | | || || || Sbjct 38855 GATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTTC 38914 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339 || |||| | | ||| |||| |||||||| |||| ||| | ||| | || | Sbjct 38915 AATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAGC 38974 Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399 || || | || || ||||| || || || || || || || | |||||||| Sbjct 38975 TGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTACGT 39034 Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459 |||| || | || ||||| ||| ||||| | || |||||||||||||| || Sbjct 39035 TTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATATG 39094 Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519 ||| || | |||| | || || |||||| ||||| || || || ||| | ||||| Sbjct 39095 CTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTTTT 39154 Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 ||| ||||||||||||||| |||||| || || ||||| ||| | ||||| Sbjct 39155 AAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205 Score = 86.0 bits (94), Expect = 9e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 80682 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGC 80741 ||||| |||||| || ||||| || ||||| || || || |||||||||||||||||||| Sbjct 39433 AAATACTTTTTTCGTCTCCTTATGGAGATTGGAAACTGCAATTCTGGCGGCTAAAATGGC 39492 Query 80742 ATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 80801 || |||| ||| | ||| || | || || ||||| || || || | || | ||| Sbjct 39493 GTAGTCTGCATGATTTGTGGTTAAGCCTGCGGCGATTTCAGCAGCAAGGCTATCTAGTTC 39552 Query 80802 TACCGTTGTTACTCC 80816 | |||||||| || Sbjct 39553 TTGAGTTGTTACGCC 39567 >seq13173 Length=15772 Score = 233 bits (258), Expect = 3e-56 Identities = 476/702 (68%), Gaps = 5/702 (1%) Strand=Plus/Minus Query 49794 ATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 49852 ||| ||||||||||| || ||| ||||| || |||||||| || || ||||||| Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552 Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATC 49912 | || | ||| | || || || || ||||| ||| ||| ||||||| || || Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492 Query 49913 TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGC 49972 ||| | ||| ||| || | || | | ||| | ||||||| || ||||||| Sbjct 14491 TAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432 Query 49973 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 50032 | || ||||||||||| | ||||| || || || || || || |||||||| || | Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372 Query 50033 CACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTG 50092 | ||||| || | |||||| || || || || ||| ||||||||| ||||| || | Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312 Query 50093 CGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-TCCACTTTTGAG 50149 ||||||| || | || | || ||| || |||| || | | | | |||| | | Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGG 14252 Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209 |||| || ||||| ||||| ||||| || || || ||||| || ||||||| Sbjct 14251 CCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGC 14192 Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269 || || | ||| | ||| || ||||| | | || |||||||||||||| | || Sbjct 14191 GTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGT 14132 Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329 | || ||||| || || || || || ||||| | |||||||| |||||||| || | Sbjct 14131 TCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGC 14072 Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 ||| ||||| | | |||||| || || || || || || || || || ||||| | Sbjct 14071 TAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACA 14012 Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 50449 |||| |||||| || || ||| || || ||||||||| | || || || | Sbjct 14011 CATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGG 13952 Query 50450 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 | | ||| || ||||| || ||||| || ||||| || |||| Sbjct 13951 ACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717961740088000