Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 441 1e-118
seq13173 233 3e-56
>seq20705
Length=54059
Score = 441 bits (488), Expect = 1e-118
Identities = 1224/1851 (66%), Gaps = 32/1851 (2%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAGAA 78797
|| ||||| || || | || |||||||| ||||| || || || || |||| ||| ||
Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426
Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857
||| || || ||||| ||| | || ||||| | || ||||| | || |||||
Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486
Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA-ATTT 78916
|||||| || || || ||||| || |||||||||||||| | | ||| ||| ||||
Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545
Query 78917 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 78972
|||| | || || || || || | | | || |||| | | || |||||
Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604
Query 78973 GATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTT 79032
|| |||| || || || ||||| || || |||| ||||| | || ||
Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664
Query 79033 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 79092
||| ||| || || || |||| |||||||| ||||| ||||| || || | | |||
Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724
Query 79093 TAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGAT 79152
||||||||| || || || || | ||||||||||| |||| ||||| ||||| |||
Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784
Query 79153 GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCT 79212
|| || ||||| ||||| | | ||| ||| | || |||| | ||| | || | |
Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGTT-TCTTAATTGACGT 37843
Query 79213 TTTA-GAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAG 79271
|||| | | | ||| ||||| | ||| | || |||||| | ||||| ||||
Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903
Query 79272 AATACCGTTACTAGCGTATGAT-CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTA 79330
|||||| ||||| | | | | ||| |||||||| || || | | || || |
Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGTGCGA 37962
Query 79331 ATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGAT 79390
|| ||||| ||||| | ||||| |||| || || |||||||||| || || |||
Sbjct 37963 GCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAA 38022
Query 79391 CTTGTGCTTCTAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAATC 79447
||| || ||| || | ||||| |||||| | | || || || || |
Sbjct 38023 GAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAAGC 38079
Query 79448 CTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAG 79507
| ||||||||||| || ||||| | || || || || ||| ||| ||||| | ||
Sbjct 38080 CCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAG 38139
Query 79508 GATAATAATTAATATCTATAATTTTATTGA-GATTCCTG--ACTATTACTTTGACCACAT 79564
||||| | || ||||| || ||||| || | | || || || || ||||| ||||
Sbjct 38140 GATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-ACAT 38196
Query 79565 CCTTTAGTTTGAGAAAATCAAATCGTCCATCTA---TTACAAACATGTTCAACGCGACAG 79621
| || | ||| ||| || || | || | |||||||| || | || | |
Sbjct 38197 CTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATGG 38256
Query 79622 ATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGA 79681
| || | || ||||| || | |||| || | | ||| | | ||||| || || |
Sbjct 38257 AAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATA 38316
Query 79682 GGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCT 79741
|| || || ||||||||||| | |||||||||||||| || ||||| | ||| |
Sbjct 38317 AATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTT 38376
Query 79742 TATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGA 79801
| | || || | |||||||||||||| | ||||| || || || || ||| |
Sbjct 38377 TGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGAG 38436
Query 79802 CTCGAGCCTTTATTATA-GACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGT 79860
| | || || ||| | || | | | | || || || | |||| ||| | |
Sbjct 38437 ATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTTTA 38495
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
|| ||||| |||||||||||||| | ||| |||||||||| | || |||||||| |||
Sbjct 38496 TCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATGAC 38555
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979
|| || ||| | | | || || |||||||| ||||| || ||||| | ||| ||| ||
Sbjct 38556 CAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAGAA 38614
Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039
||||||| || | || ||||| || || || || ||||| | || | || | |
Sbjct 38615 AAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAA 38674
Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099
| || |||||||| ||||| || || || || | | || || || || |||||
Sbjct 38675 CACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCC 38734
Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159
||| || | || | ||| ||| ||| ||||||| | |||||| | | |||||| ||
Sbjct 38735 CTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTGA 38794
Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACC 80219
|| ||||| || || |||| | | || | |||||||| || || ||
Sbjct 38795 AGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCCC 38854
Query 80220 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTC 80279
||||| || || ||| || || | ||||||| ||| | | | | | || || ||
Sbjct 38855 GATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTTC 38914
Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCC 80339
|| |||| | | ||| |||| |||||||| |||| ||| | ||| | || |
Sbjct 38915 AATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAGC 38974
Query 80340 CGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGT 80399
|| || | || || ||||| || || || || || || || | ||||||||
Sbjct 38975 TGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTACGT 39034
Query 80400 CTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTG 80459
|||| || | || ||||| ||| ||||| | || |||||||||||||| ||
Sbjct 39035 TTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATATG 39094
Query 80460 CTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTT 80519
||| || | |||| | || || |||||| ||||| || || || ||| | |||||
Sbjct 39095 CTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTTTT 39154
Query 80520 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570
||| ||||||||||||||| |||||| || || ||||| ||| | |||||
Sbjct 39155 AAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205
Score = 86.0 bits (94), Expect = 9e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 80682 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGC 80741
||||| |||||| || ||||| || ||||| || || || ||||||||||||||||||||
Sbjct 39433 AAATACTTTTTTCGTCTCCTTATGGAGATTGGAAACTGCAATTCTGGCGGCTAAAATGGC 39492
Query 80742 ATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTC 80801
|| |||| ||| | ||| || | || || ||||| || || || | || | |||
Sbjct 39493 GTAGTCTGCATGATTTGTGGTTAAGCCTGCGGCGATTTCAGCAGCAAGGCTATCTAGTTC 39552
Query 80802 TACCGTTGTTACTCC 80816
| |||||||| ||
Sbjct 39553 TTGAGTTGTTACGCC 39567
>seq13173
Length=15772
Score = 233 bits (258), Expect = 3e-56
Identities = 476/702 (68%), Gaps = 5/702 (1%)
Strand=Plus/Minus
Query 49794 ATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 49852
||| ||||||||||| || ||| ||||| || |||||||| || || |||||||
Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552
Query 49853 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATC 49912
| || | ||| | || || || || ||||| ||| ||| ||||||| || ||
Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492
Query 49913 TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGC 49972
||| | ||| ||| || | || | | ||| | ||||||| || |||||||
Sbjct 14491 TAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432
Query 49973 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 50032
| || ||||||||||| | ||||| || || || || || || |||||||| || |
Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372
Query 50033 CACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTG 50092
| ||||| || | |||||| || || || || ||| ||||||||| ||||| || |
Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312
Query 50093 CGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-TCCACTTTTGAG 50149
||||||| || | || | || ||| || |||| || | | | | |||| | |
Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGG 14252
Query 50150 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 50209
|||| || ||||| ||||| ||||| || || || ||||| || |||||||
Sbjct 14251 CCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGC 14192
Query 50210 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 50269
|| || | ||| | ||| || ||||| | | || |||||||||||||| | ||
Sbjct 14191 GTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGT 14132
Query 50270 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTAC 50329
| || ||||| || || || || || ||||| | |||||||| |||||||| || |
Sbjct 14131 TCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGC 14072
Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389
||| ||||| | | |||||| || || || || || || || || || ||||| |
Sbjct 14071 TAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACA 14012
Query 50390 CATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 50449
|||| |||||| || || ||| || || ||||||||| | || || || |
Sbjct 14011 CATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGG 13952
Query 50450 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491
| | ||| || ||||| || ||||| || ||||| || ||||
Sbjct 13951 ACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717961740088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |