Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 435 4e-117
>seq20705
Length=54059
Score = 435 bits (482), Expect = 4e-117
Identities = 1239/1884 (66%), Gaps = 38/1884 (2%)
Strand=Plus/Plus
Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGC---TTTCGTACGTAGATAGTACATG 70848
||||| | ||||||||||| || | ||| || ||| || || | || |||||
Sbjct 37338 TTGTCAACAGTAAACTGAAT---AGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATT 37394
Query 70849 CCTGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907
|||||||| || || || || |||| ||||||||| || || ||||| |||| |
Sbjct 37395 CCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTT 37453
Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967
|| || || | ||||||||| | |||||||||||||| || || || ||||| || ||
Sbjct 37454 GGGCTCTGCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGC 37513
Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATA-AACTCGCTTA 71025
|||||||||||| | | ||| ||| |||||||| | || || || || || | |
Sbjct 37514 AGCCATTTTTATTGTTGA-TTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGA 37572
Query 71026 ATATCTTCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTT 71082
| || |||| | | || ||||| || |||| || || || ||
Sbjct 37573 CG-TGTTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTC 37631
Query 71083 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACT 71142
|| || || |||| ||||| | || || ||| ||| || || ||| |||| |||
Sbjct 37632 TTCATGTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACT 37691
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
||||| ||||| ||||| || || | | |||||||||||| || ||||| || |
Sbjct 37692 ACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAG 37751
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
|| |||||||| |||| ||||| ||||| ||||| || ||||| ||||| | | | |
Sbjct 37752 GATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAA 37811
Query 71263 CTATTTCTAAGACCATGTGATCGGATTTTATCTTTTA-GAGATTCCCAATTCCAAAGATC 71321
||| | || || ||| || | || | ||||| | | | ||| | ||| | |||
Sbjct 37812 GAATTGCGAACGCCGTGTT-TCTTAATTGACGTTTTAAGTGTATTCCAGTCCCATAAATC 37870
Query 71322 CGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT-CCTG 71380
| ||| || || ||||| | | | | |||
Sbjct 37871 TGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCAC-TGGGCTGCCTT 37929
Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440
||||||| ||||| || | || || || || || ||||| ||||| | ||||||
Sbjct 37930 CATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAA 37989
Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500
|||| || || |||||||||| || || ||| ||| || ||| || | ||||
Sbjct 37990 AATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGGAT 38049
Query 71501 AAT---TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGT 71557
| |||||| | | || || || || || ||||| ||||| || ||||| | ||
Sbjct 38050 ACCGCATTAAGA---TCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGACGGT 38106
Query 71558 GTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 71617
| || || || ||| ||| ||||| | ||||||| | || ||||| || ||||| |
Sbjct 38107 GCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGT 38166
Query 71618 TGA-GATTTCTG--ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674
| | | ||| || || || ||||| ||||| || | ||| ||| || || |
Sbjct 38167 TCAAGTTTTTTGTAACAAT--CTTTGTT-ACATCTTTCAATTTTTTAAAGTCGTATTTTT 38223
Query 71675 CATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731
|| | ||||||| || | ||| | || || | || ||||| || | ||||
Sbjct 38224 TTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATTTCAT 38283
Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791
|| ||| ||| | | |||||| || || | ||| || || || |||||||| | |
Sbjct 38284 CAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCAACGT 38343
Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851
||||||||||||| || ||||| | ||| || | || ||| | |||||||||||||
Sbjct 38344 TTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCAGTTT 38403
Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTT-GTAT 71910
| | ||||| || || || || ||| | | | || || ||| | || | |
Sbjct 38404 CTACTTGAGACTCAATTATAGCAAACCACAGAGATTGCGCTTTAATTGTTCGATTAGCAC 38463
Query 71911 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT 71970
| || || || | |||| ||| | | || ||||| ||||||||| ||| | |
Sbjct 38464 GGCCTTCCTGTT-CATATTTGACATAGAGTTTATCAAACTCTTCTCCCCAAACATCATGT 38522
Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030
|| |||||||||| || || |||||||||||||| || ||| | | | || || |||
Sbjct 38523 AAGCCAGGACATTTATGTGGGCACATCAATGACCAATCCTCATTAGCTTCAACACGCTTC 38582
Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTT 72089
||||| ||||| || ||||| | ||| ||| || ||||||| || | || ||||| ||
Sbjct 38583 ATAAAAAGATCTGGTATCCATAAAGC-ATAGAAAAGATCTCGGGCACGATTTTCCTCCTT 38641
Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149
|| || || ||||| | || | || | | | || |||||||| ||||| || ||
Sbjct 38642 GCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAACACGTCTGAATGCCAAGGTTCTAAATA 38701
Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209
|| || | | || || || || |||||||| || | || | ||| ||| ||
Sbjct 38702 AATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGTCAACATAGCGAGCCACGTTGTT 38761
Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269
| ||||||| | |||||| | | |||||| || | ||||| || || |||| | |
Sbjct 38762 AAAAACTCTTAGCATTGGCACCAAACCATTTGAAGTTCCATTAGTTCCACAGATCGAAGT 38821
Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
|| | |||||||| | || || || ||||| || || ||| || || |
Sbjct 38822 ACCTTTAGCACGAATGCAGTGAACGTTTATCCCGATTCCACCAGCTGATTTGGATATCAT 38881
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389
||||||| ||| | | | | | || || || || |||| ||| ||| |||| ||
Sbjct 38882 TGCGCATTGTTCGACGGATTTAAATATTCCTTCAATTGAATCAGCCACCATCGTAAGAAG 38941
Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449
|||||| |||| ||| | ||| | || | || || | || || ||||| ||
Sbjct 38942 AAAACACGACGACAGTTGCGGCCGATTTGTAGCTGCCGCGAAAAGTGTTGGCGAAGCATG 39001
Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509
|| || || || || || | |||||||| |||| || | || |||||
Sbjct 39002 GGTGAAATATCGCTCGGAAAGCAAGTTGTACGTTTCAACTGCCGCATCGATATCTTCGCC 39061
Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569
||||||||| | || |||||||||||||||||||| || | |||| | || || |||
Sbjct 39062 ATGTATTCCAATGGCCACACGCATTAACATATGCTGTGGGCGTTCAGCAATTTTCCCATT 39121
Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629
||| ||||| || || || ||| | |||||||| ||||||||||||||| ||||||
Sbjct 39122 TATCTTCAATAAATATGAACGTTCAAGCGTTTTAAATCCAAAATAGTTGTATCCAAAGTC 39181
Query 72630 TCGTTCGTAAATAATAACCGAATT 72653
|| || ||||| ||| | || ||
Sbjct 39182 CCGATCATAAATTATAGCTGAGTT 39205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670852287992000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |