Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq20705 435 4e-117 >seq20705 Length=54059 Score = 435 bits (482), Expect = 4e-117 Identities = 1239/1884 (66%), Gaps = 38/1884 (2%) Strand=Plus/Plus Query 70792 TTGTCCAATGTAAACTGAATGGGAGAGGATGCGGC---TTTCGTACGTAGATAGTACATG 70848 ||||| | ||||||||||| || | ||| || ||| || || | || ||||| Sbjct 37338 TTGTCAACAGTAAACTGAAT---AGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATT 37394 Query 70849 CCTGTTTTTAGACCGAGACT-CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCT 70907 |||||||| || || || || |||| ||||||||| || || ||||| |||| | Sbjct 37395 CCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTT 37453 Query 70908 AGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGC 70967 || || || | ||||||||| | |||||||||||||| || || || ||||| || || Sbjct 37454 GGGCTCTGCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGC 37513 Query 70968 AGCCATTTTTATGATCGTCTTTTGTGGA-ATTTCCCAAATAGTTTTATA-AACTCGCTTA 71025 |||||||||||| | | ||| ||| |||||||| | || || || || || | | Sbjct 37514 AGCCATTTTTATTGTTGA-TTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGA 37572 Query 71026 ATATCTTCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTT 71082 | || |||| | | || ||||| || |||| || || || || Sbjct 37573 CG-TGTTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTC 37631 Query 71083 TTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACT 71142 || || || |||| ||||| | || || ||| ||| || || ||| |||| ||| Sbjct 37632 TTCATGTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACT 37691 Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 ||||| ||||| ||||| || || | | |||||||||||| || ||||| || | Sbjct 37692 ACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAG 37751 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 || |||||||| |||| ||||| ||||| ||||| || ||||| ||||| | | | | Sbjct 37752 GATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAA 37811 Query 71263 CTATTTCTAAGACCATGTGATCGGATTTTATCTTTTA-GAGATTCCCAATTCCAAAGATC 71321 ||| | || || ||| || | || | ||||| | | | ||| | ||| | ||| Sbjct 37812 GAATTGCGAACGCCGTGTT-TCTTAATTGACGTTTTAAGTGTATTCCAGTCCCATAAATC 37870 Query 71322 CGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT-CCTG 71380 | ||| || || ||||| | | | | ||| Sbjct 37871 TGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCAC-TGGGCTGCCTT 37929 Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 ||||||| ||||| || | || || || || || ||||| ||||| | |||||| Sbjct 37930 CATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAA 37989 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 |||| || || |||||||||| || || ||| ||| || ||| || | |||| Sbjct 37990 AATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGGAT 38049 Query 71501 AAT---TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGT 71557 | |||||| | | || || || || || ||||| ||||| || ||||| | || Sbjct 38050 ACCGCATTAAGA---TCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGACGGT 38106 Query 71558 GTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 71617 | || || || ||| ||| ||||| | ||||||| | || ||||| || ||||| | Sbjct 38107 GCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGT 38166 Query 71618 TGA-GATTTCTG--ACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674 | | | ||| || || || ||||| ||||| || | ||| ||| || || | Sbjct 38167 TCAAGTTTTTTGTAACAAT--CTTTGTT-ACATCTTTCAATTTTTTAAAGTCGTATTTTT 38223 Query 71675 CATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT 71731 || | ||||||| || | ||| | || || | || ||||| || | |||| Sbjct 38224 TTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATTTCAT 38283 Query 71732 TAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791 || ||| ||| | | |||||| || || | ||| || || || |||||||| | | Sbjct 38284 CAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCAACGT 38343 Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851 ||||||||||||| || ||||| | ||| || | || ||| | ||||||||||||| Sbjct 38344 TTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCAGTTT 38403 Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTT-GTAT 71910 | | ||||| || || || || ||| | | | || || ||| | || | | Sbjct 38404 CTACTTGAGACTCAATTATAGCAAACCACAGAGATTGCGCTTTAATTGTTCGATTAGCAC 38463 Query 71911 CTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCT 71970 | || || || | |||| ||| | | || ||||| ||||||||| ||| | | Sbjct 38464 GGCCTTCCTGTT-CATATTTGACATAGAGTTTATCAAACTCTTCTCCCCAAACATCATGT 38522 Query 71971 AATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTC 72030 || |||||||||| || || |||||||||||||| || ||| | | | || || ||| Sbjct 38523 AAGCCAGGACATTTATGTGGGCACATCAATGACCAATCCTCATTAGCTTCAACACGCTTC 38582 Query 72031 ATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTT 72089 ||||| ||||| || ||||| | ||| ||| || ||||||| || | || ||||| || Sbjct 38583 ATAAAAAGATCTGGTATCCATAAAGC-ATAGAAAAGATCTCGGGCACGATTTTCCTCCTT 38641 Query 72090 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 72149 || || || ||||| | || | || | | | || |||||||| ||||| || || Sbjct 38642 GCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAACACGTCTGAATGCCAAGGTTCTAAATA 38701 Query 72150 TATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 72209 || || | | || || || || |||||||| || | || | ||| ||| || Sbjct 38702 AATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGTCAACATAGCGAGCCACGTTGTT 38761 Query 72210 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 72269 | ||||||| | |||||| | | |||||| || | ||||| || || |||| | | Sbjct 38762 AAAAACTCTTAGCATTGGCACCAAACCATTTGAAGTTCCATTAGTTCCACAGATCGAAGT 38821 Query 72270 TCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 || | |||||||| | || || || ||||| || || ||| || || | Sbjct 38822 ACCTTTAGCACGAATGCAGTGAACGTTTATCCCGATTCCACCAGCTGATTTGGATATCAT 38881 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 72389 ||||||| ||| | | | | | || || || || |||| ||| ||| |||| || Sbjct 38882 TGCGCATTGTTCGACGGATTTAAATATTCCTTCAATTGAATCAGCCACCATCGTAAGAAG 38941 Query 72390 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 72449 |||||| |||| ||| | ||| | || | || || | || || ||||| || Sbjct 38942 AAAACACGACGACAGTTGCGGCCGATTTGTAGCTGCCGCGAAAAGTGTTGGCGAAGCATG 39001 Query 72450 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG 72509 || || || || || || | |||||||| |||| || | || ||||| Sbjct 39002 GGTGAAATATCGCTCGGAAAGCAAGTTGTACGTTTCAACTGCCGCATCGATATCTTCGCC 39061 Query 72510 ATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATT 72569 ||||||||| | || |||||||||||||||||||| || | |||| | || || ||| Sbjct 39062 ATGTATTCCAATGGCCACACGCATTAACATATGCTGTGGGCGTTCAGCAATTTTCCCATT 39121 Query 72570 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 72629 ||| ||||| || || || ||| | |||||||| ||||||||||||||| |||||| Sbjct 39122 TATCTTCAATAAATATGAACGTTCAAGCGTTTTAAATCCAAAATAGTTGTATCCAAAGTC 39181 Query 72630 TCGTTCGTAAATAATAACCGAATT 72653 || || ||||| ||| | || || Sbjct 39182 CCGATCATAAATTATAGCTGAGTT 39205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670852287992000