Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 212 9e-50
seq15610 170 3e-37
seq5260 149 9e-31
>seq13173
Length=15772
Score = 212 bits (234), Expect = 9e-50
Identities = 495/738 (67%), Gaps = 44/738 (6%)
Strand=Plus/Plus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
|||| | || || || ||||||||||||||||| ||||||||||||||| || ||||
Sbjct 13910 AGGCCGAAGCATCTTTCTGGACGGTCGAAGAGGTGGATCTGTCCAAGGACATGACAGATT 13969
Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTG 125157
| || ||| ||||||| | |||||| | |||||||| || | ||||| ||||| |
Sbjct 13970 G---GAATCGCCTGACTGACAATGAGCGTCACTTTATATCTCATGTGTTGGCATTCTTCG 14026
Query 125158 CCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCA 125217
||| || ||||| || |||||||| |||||| | ||| || || ||| || |
Sbjct 14027 CCGCATCAGATGGCATTGTCAACGAAAATCTGGTAGAACGCTTTAGCCAGGAGGTGCAGA 14086
Query 125218 TTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAA 125277
| | |||| || ||||| || |||||||| || ||||||||||| |||||||
Sbjct 14087 TAACCGAGGCACGTTGTTTTTATGGCTTCCAAATTGCCATGGAGAACGTGCATTCGGAAA 14146
Query 125278 TGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC---ACATGCTCT 125334
||||| ||| || |||| || || || ||||| || | ||| || || |
Sbjct 14147 TGTACAGCGTACTTATCGACACCTATATACGTGATCCTCA---TCAACGCGACTATCTTT 14203
Query 125335 TTAACGCAATCGACACGGTGCCGTCTATACGTAAA----AAGGCTCAATGGGTGATTCGG 125390
| || || || || || |||| | ||||| ||||| | |||| |
Sbjct 14204 TCAATGCGATTGAGACTATGCC----AGCAGTAAAGCGCAAGGCGGACTGGGCCCTCGCT 14259
Query 125391 TGGA-----TCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCG 125445
|||| || | | | | | | || || || | | | || || |||||||
Sbjct 14260 TGGATTTCTTCAAAGTCAGCCAATTTTGGT-----GAACGCATTATAGCTTTTGCCGCCG 14314
Query 125446 TAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGAC 125505
| || |||||||||||| || || || || | ||||||||| | ||||||||||| |
Sbjct 14315 TCGAAGGCATCTTCTTTAGTGGCAGCTTCGCTTCAATCTTTTGGTTGAAGAAGCGCGGTC 14374
Query 125506 TCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTG 125565
| |||||||| || || | || ||||| || || || |||||||| ||||| || |
Sbjct 14375 TTATGCCCGGTCTTACCTTCTCAAATGAGTTAATTTCACGCGACGAGGGTCTACATTGCG 14434
Query 125566 ACTTTGCCATTCTACTGTTTC-GCAACT--ATCTGCGTCCCGAGTGCAGATC-CAGCGAT 125621
| |||||| | || |||| | ||| || || |||||| ||| || | || |
Sbjct 14435 ATTTTGCCGTGCTGATGTTCCAGCATCTGGTTCAACGTCCC-AGTCGTGAACGCATTATT 14493
Query 125622 GAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAA 125681
|||| |||| || | ||||| || || ||||| ||||| || || ||
Sbjct 14494 GAAA---TCAT-----TT----CAGATGCTGTAGTCATCGAACAGGAGTTCCTCACAGAC 14541
Query 125682 TCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTT 125741
| | || || | | | ||||||||||| ||||| || |||| || ||||| || |||
Sbjct 14542 GCTTTGCCCGTAAACTTAATTGGCATGAATTGCAAACTGATGTCTGAATACATTGAATTT 14601
Query 125742 GTGGCAGATCGTCTACTG 125759
|| || |||||||| |||
Sbjct 14602 GTCGCCGATCGTCTGCTG 14619
>seq15610
Length=28256
Score = 170 bits (188), Expect = 3e-37
Identities = 381/572 (67%), Gaps = 14/572 (2%)
Strand=Plus/Minus
Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161
|||||||| |||||||| ||||| || || || | || ||||||||||| || || ||
Sbjct 15678 TTGCGGTAGAAGATGACGCCGGCGCGTGGCCCGCGCAGCGTCTTGTGCGTGGTTGTTGTT 15619
Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221
|||||||| | | || || || ||||| | | | | || | | ||| || | |
Sbjct 15618 ACAATGTCCGCAAATTCGAAAGGTGAGGGAATCAACTCGGCGGCTACTAGGCCAGCCACG 15559
Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281
|| || ||||||||||| | ||| ||| | ||| |||| ||||| || |
Sbjct 15558 TGCGCCATATCGGCCATTAAATAGGCGCCAACCTGATCACAGATCTTGCGGAAACGCTCA 15499
Query 127282 TAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGA 127341
||||||| | || | || ||| ||||||| || || | | ||| |||
Sbjct 15498 TAGTCCAGCAGACGGGAGTAACAAGAAATGCCGGCAATAATGATCTGAGGGCGGAACGTC 15439
Query 127342 TTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTAC 127401
|||||| ||| | | || | || |||| || |||||||| |||| |||||| ||
Sbjct 15438 TTGGCAGCCTCCTCCAACTTATCGTAATCGATGATGCCAGTCTGGGGATTCACCTTATAG 15379
Query 127402 GGCATGCTTTCGAAAAAGAGTGATGTAGCGGACACG------------TTGCGGAATCCG 127449
|||||||||||||| ||| || || || || | | || ||| ||
Sbjct 15378 GGCATGCTTTCGAAGTAGATGGACGTGGCTGAGATGCGCTTGTTTGGTGTGAAGAAGCCA 15319
Query 127450 TGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACG 127509
||||||| ||||| || ||||| ||||| || |||||||| | | ||||||| | |
Sbjct 15318 TGCGTCAAATGGCCACCATCGGGAAGATCTAGACCCATGATACGATCGTGCGGACGACAG 15259
Query 127510 ATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCC 127569
| || ||||| | ||||| |||||| ||| ||||| || ||||| ||| || |||
Sbjct 15258 ACGCCCGTGTAGGCTGCAAAATTGGCCGGCGATCCCGAATAAGGTTGCACATTGACGCCC 15199
Query 127570 CATTCGGACTCGTTCAAATTGAACGCTCTGAGACATCGCTGCTGTGCTA-GCAGTTCGAT 127628
|| || || || | ||||||| ||| | || ||| || | ||| |||||
Sbjct 15198 CACTCATCCTTATTGAGATTGAACAAGTGGAGGCCGCGACTCTGAGCCATGCA-CTCGAT 15140
Query 127629 GCGATCGATAAACTCGTTACCACCATAGTATC 127660
|||| || ||||| || || ||||||||||
Sbjct 15139 CTGATCAATGAACTCATTGCCGCCATAGTATC 15108
>seq5260
Length=19401
Score = 149 bits (164), Expect = 9e-31
Identities = 330/490 (67%), Gaps = 10/490 (2%)
Strand=Plus/Plus
Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126
|||||| |||| || || || || || || ||| | |||| ||| | | |||| |
Sbjct 11932 GGCGATTTGGGACCCGTCTATGGTTTTCAATGGCGCCACTTTGGCGCACAATATGGCACC 11991
Query 70127 TGCGA-GACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAA-TCATTGACACTC 70184
|| || ||| |||||| | || |||| | ||||| ||| | || | ||||||||
Sbjct 11992 TGTGACGAC-GACTATACAGGCAAGGGCATCGATCAGCTGC-GTCAGGTGATTGACACCA 12049
Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244
| | ||||||| ||||| | |||| | |||| | |||||||| ||| | |
Sbjct 12050 TACGCAACAATCCATCAGATCGACGGATTATTATGTCTGCCTGGAATCCAATTGATATAC 12109
Query 70245 ACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGA------TG 70298
||||||| || || || || ||||| || || ||||| || || | | ||
Sbjct 12110 CAAAAATGGCGCTGCCGCCTTGCCACTGCTTCGCCCAGTTCTATGTGTCCCAGGATCGTG 12169
Query 70299 GCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTA 70358
|| | |||| || | ||||| | || || |||||||| | ||||| |||||||
Sbjct 12170 GCGAGCTGTCCTGTCAGTTATATCAACGAAGCGCTGACATGGGTTTGGGTGTGCCCTTTA 12229
Query 70359 ACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGC 70418
||||||| ||| | || | || ||||||| ||||| | || ||||| || ||
Sbjct 12230 ACATTGCCTCGTATGCGTTGCTCACCTACATGATCGCTCATGTGACTGGCCTCAAGCCGG 12289
Query 70419 ACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAA 70478
||| || || |||||||| || ||| | || |||||||| || || | || ||||| |
Sbjct 12290 GCGACTTTGTGCACACCATGGGAGACACGCATGTGTATTTGAACCATGTGGATCCATTGA 12349
Query 70479 AGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTG 70538
| | |||||| |||| ||||| | || ||||| || ||| | ||| || |||||
Sbjct 12350 ATGAGCAACTTAAACGCCAGCCGCGGCCCTTTCCGAAACTGCACTTTAAGCGCAAAGTCC 12409
Query 70539 AAAATATTGA 70548
| |||||||
Sbjct 12410 AGGATATTGA 12419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740742397192000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |