Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq20705 93.3 4e-14 >seq20705 Length=54059 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || | |||||| |||||||| |||||||| ||| || ||| | |||||| Sbjct 6877 CACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTC 6936 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 |||||||||||| ||| | || || | |||||||| || | || |||||||| Sbjct 6937 CAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTG 6996 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||| || ||| || | | | | ||| |||||| || | ||| ||||| || Sbjct 6997 AATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTT 7056 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||| || | || || || ||||| |||||| Sbjct 7057 GCCCGTTAGGGTCTTAACGAAAATCTGCATT 7087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419412310810200