Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 113 4e-20
>seq13173
Length=15772
Score = 113 bits (124), Expect = 4e-20
Identities = 379/580 (65%), Gaps = 10/580 (2%)
Strand=Plus/Minus
Query 12986 TCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACA 13045
|| || ||||| || ||||| | ||| | | || ||||| || ||||| |||||
Sbjct 14609 TCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTACG 14550
Query 13046 GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTT 13105
|||| ||| ||||| | || | | ||| || | || || || || || || |
Sbjct 14549 GGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAATA 14490
Query 13106 ATTACGTTCTCTAATGGAGGATTTGAT--AGATGCTTAAACATCATACATGCAAAATCAC 13163
|| ||||| | | ||| | |||| ||||||| ||||||| |||||||| |
Sbjct 14489 ATG-CGTTCACGACTGG-GACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432
Query 13164 AGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCC 13223
| || | || || || | |||| ||| ||||| || || ||||| |||||||| |
Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372
Query 13224 CTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTG 13283
| || || || | |||||| || | ||| || || ||| || || ||||| || |
Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312
Query 13284 CTGCAAACGCTATCAACCTTTCACCATACGTA-CT-ATTTTTACTCTCTATCCACTTTCT 13341
| ||||| ||||| | | ||||||| | | || | ||| | |||||
Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAA--ATCCAAGCGAG 14254
Query 13342 GGCCCAGTTTGCTTTTTGTTTAAC-GCAGTTCATATTTTCTATTGCGTTAAATAAATAAt 13400
|||||||| || || | || || || | |||| | || || || || || | ||| |
Sbjct 14253 GGCCCAGTCCGCCTTGCGCTTTACTGCTGG-CATAGTCTCAATCGCATTGAAAAGATAGT 14195
Query 13401 ttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAA 13460
|| | | || ||||| || || || | || ||| |||||||| ||||| |
Sbjct 14194 CGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCA 14135
Query 13461 TATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGG 13520
|| ||||| || |||||||| ||||||||||| | ||||| | || ||| || ||
Sbjct 14134 CGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCT 14075
Query 13521 AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTC 13560
| ||| | |||| | | |||||||| || || || ||
Sbjct 14074 GGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATC 14035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430802761148400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |