Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq6675 114 1e-20
>seq6675
Length=94874
Score = 114 bits (126), Expect = 1e-20
Identities = 176/251 (70%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299
||||| ||||| || || | ||||| || || ||||| |||| || ||| |
Sbjct 58955 CCGGTTGAACCAAAACCGGCCTCGCCACGTTCAGTGTCTTCCAGCTTGTCCACCATCTCC 59014
Query 5300 ACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACC 5359
| | | |||| | ||||| || || || | ||||| || | ||| || ||| |||
Sbjct 59015 AGTTCCGGGTAGAAGATGCGCTCACAAATGAATTGAGCAATGCGGTCGCCACGCTTCACC 59074
Query 5360 TCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCG 5419
||||||||| ||| | | || || || || || || | ||||| || |||||||||
Sbjct 59075 TCAAAGTCGGTGTCTGAGTGATTGAAGAGGACGACGCCCAGGTTGCCGCGATAGTCTTCG 59134
Query 5420 TCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCT 5479
|| | || || ||||| || || || |||| || ||||| |||||||||||||| ||
Sbjct 59135 TCCACCACACCGGCGCCAACATCAATGAAGTTCTTCACCGCCAGGCCGGAACGTGGGGCC 59194
Query 5480 ATGCGTCCGTA 5490
| |||||||||
Sbjct 59195 ACGCGTCCGTA 59205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447558986704000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |