Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq6675 114 1e-20 >seq6675 Length=94874 Score = 114 bits (126), Expect = 1e-20 Identities = 176/251 (70%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299 ||||| ||||| || || | ||||| || || ||||| |||| || ||| | Sbjct 58955 CCGGTTGAACCAAAACCGGCCTCGCCACGTTCAGTGTCTTCCAGCTTGTCCACCATCTCC 59014 Query 5300 ACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACC 5359 | | | |||| | ||||| || || || | ||||| || | ||| || ||| ||| Sbjct 59015 AGTTCCGGGTAGAAGATGCGCTCACAAATGAATTGAGCAATGCGGTCGCCACGCTTCACC 59074 Query 5360 TCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCG 5419 ||||||||| ||| | | || || || || || || | ||||| || ||||||||| Sbjct 59075 TCAAAGTCGGTGTCTGAGTGATTGAAGAGGACGACGCCCAGGTTGCCGCGATAGTCTTCG 59134 Query 5420 TCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCT 5479 || | || || ||||| || || || |||| || ||||| |||||||||||||| || Sbjct 59135 TCCACCACACCGGCGCCAACATCAATGAAGTTCTTCACCGCCAGGCCGGAACGTGGGGCC 59194 Query 5480 ATGCGTCCGTA 5490 | ||||||||| Sbjct 59195 ACGCGTCCGTA 59205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447558986704000