Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq11924 120 2e-22
seq13640 116 2e-21
seq10360 116 2e-21
seq4465 113 2e-20
>seq11924
Length=3114
Score = 120 bits (132), Expect = 2e-22
Identities = 84/94 (89%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 11437 AATTAATAAAAAATCAAATT-GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495
||||| |||||| | || || ||||||||| |||||||||| ||||||||||||||||
Sbjct 2627 AATTA-TAAAAAGTAAATTTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 2569
Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||||| ||||||||||||||||||||
Sbjct 2568 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 2535
>seq13640
Length=77883
Score = 116 bits (128), Expect = 2e-21
Identities = 71/76 (93%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513
|||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 17419 ATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCA 17478
Query 11514 ACTGAGCTAATGGGCC 11529
||||||||||||||||
Sbjct 17479 ACTGAGCTAATGGGCC 17494
>seq10360
Length=64148
Score = 116 bits (128), Expect = 2e-21
Identities = 76/83 (92%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 23483 TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 23424
Query 11515 CTGAGCTAATGGGCCGTCGACGA 11537
||||||||||||||| |||| ||
Sbjct 23423 CTGAGCTAATGGGCC-TCGATGA 23402
>seq4465
Length=7943
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 990 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 931
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 930 TGAGCTAATGGGCC 917
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261382207199200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |