Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 118 1e-21
seq30232 113 4e-20
>seq20705
Length=54059
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
|||||||||||| ||||| || ||||| | ||| || ||| || |||| ||| ||
Sbjct 6877 CACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTC 6936
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|| ||||| || ||||||| | | ||| |||||||||||||| || |||||||| |
Sbjct 6937 CAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTG 6996
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || || ||||| ||| || || | | ||||| |||| |||||||| ||
Sbjct 6997 AATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTT 7056
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || ||||||||
Sbjct 7057 GCCCGTTAGGGTCTTAACGAAAATCTGCAT 7086
>seq30232
Length=15380
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
|||||| |||||||| || ||||| || | ||| || ||| || |||| |||||
Sbjct 15121 CACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTC 15180
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
|||||| || || | ||||| || | ||||||||||| ||||| ||||| ||||| |
Sbjct 15181 CAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTG 15240
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
||| || ||||| || | | || || | | | || || || | |||||||| ||
Sbjct 15241 AATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTT 15300
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| | || ||||| |||||||||||
Sbjct 15301 GCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| || | ||| || | |||||||||||| || || ||||| || | ||| || ||| |
Sbjct 14876 CCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 14935
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| ||||||||||| || || | ||||| || | ||||||||||| |||
Sbjct 14936 AAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 14995
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||| ||||| | || || ||||| || | | || || | | | || ||
Sbjct 14996 ATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACT 15055
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | |||||||| || ||||| | || || || |||||||||||
Sbjct 15056 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448099555512000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |