Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq24608 105 1e-18 >seq24608 Length=5013 Score = 105 bits (116), Expect = 1e-18 Identities = 107/137 (78%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||||||| || | | | || ||||| ||||| ||||| || ||||| |||| Sbjct 2408 CGCTAAGCGTCATCGCAAGGTGT-TGCGTGATAATATCCAGGGAATAACTAAGCCTGCTA 2466 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || || |||||||||| ||||| |||||||| | || || ||| | |||||||| | Sbjct 2467 TTCGCCGCTTGGCTCGTCGCGGTGGCGTCAAGCGCATTTCGGGCTTGATTTATGAAGAAA 2526 Query 16551 TTCGTGATGTTTTGAAG 16567 |||| || |||||| Sbjct 2527 CCCGTGGCGTCTTGAAG 2543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79043930700600