Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 421 8e-113
seq13173 221 2e-52
>seq20705
Length=54059
Score = 421 bits (466), Expect = 8e-113
Identities = 1220/1853 (66%), Gaps = 36/1853 (2%)
Strand=Plus/Plus
Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 62074
|| ||||| || || | || |||||||| ||||| || || || || |||| ||||||
Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426
Query 62075 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62134
||| || || ||||| ||| | || ||||| | || ||||| | || |||||
Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486
Query 62135 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA-ATTT 62193
|||||| || || || ||||| || |||||||||||||| | | ||| ||| ||||
Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545
Query 62194 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 62249
|||| | || || || || || | | | || |||| | | || |||||
Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604
Query 62250 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62309
|| |||| || || || ||||| || || |||| ||||| | || ||
Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664
Query 62310 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62369
||| ||| || || || |||| |||||||| ||||| ||||| || || | | |||
Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724
Query 62370 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62429
||||||||| || ||||| || | || |||||||| |||| ||||| ||||| |||
Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784
Query 62430 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCT 62489
|| || ||||| ||||| | | ||| ||| | || |||| | |||| | || | |
Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843
Query 62490 TTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 62548
|||| || | ||| | ||| | ||| | || ||||
Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903
Query 62549 AATACCGTTACTGGCGTACGAT-CCTACATATGTATCGTA-TGGTCCT-TCCTTCTCAGC 62605
|||||| ||||| | | | | ||| ||||||| ||||| | | | | | ||| | ||
Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960
Query 62606 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62665
|| || ||||| ||||| | || || |||| || || ||||| |||| || |||||
Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020
Query 62666 ATCTTGTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAA 62722
| ||| || ||| || | ||||| |||||| | | || || || ||
Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAA 38077
Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782
|| ||||||||||| || ||||| | || || || || ||| ||| ||||| |
Sbjct 38078 GCCCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAG 38137
Query 62783 AGGATAATAATTAATATCTATAATTTTATTGA-GATTTCTG--ACAATTACTTTGACCAC 62839
||||||| | || ||||| || ||||| || | | ||| || ||||| ||||| ||
Sbjct 38138 AGGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-AC 38194
Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAAC 62896
||| |||| ||| ||| || || || | |||||||| || | ||| |
Sbjct 38195 ATCTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTAT 38254
Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956
|| || | || ||||| || | |||| || | | ||| | | || || || ||
Sbjct 38255 GGAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACA 38314
Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016
| ||| || || || || ||||| | |||||||||||||| || ||||| | |||
Sbjct 38315 TAAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATC 38374
Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076
|| | || || |||||||||||||||| | ||||| || || || || ||| |
Sbjct 38375 TTTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAG 38434
Query 63077 GACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATC 63135
| | || || ||| | |||| | | |||| || || | ||| ||| | |
Sbjct 38435 AGATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTT 38493
Query 63136 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 63195
|| ||||| ||||||||||||| | || |||||||||| || || |||||||| |
Sbjct 38494 TATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATG 38553
Query 63196 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 63254
|||| || | | | | | || || |||||||| ||||| || ||||| | ||| |||
Sbjct 38554 ACCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAG 38612
Query 63255 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63314
|| ||||||| || | || |||||| || || || || ||||| | || | || |
Sbjct 38613 AAAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCA 38672
Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374
| | || |||||||| ||||| || || || || | | ||||| || || |||
Sbjct 38673 AACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCT 38732
Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434
||||| || | || | ||| ||| ||| ||||||| | |||||| | | ||| |||
Sbjct 38733 CCCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTT 38792
Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494
|| | ||||| || || |||| | | || | |||||||| || ||
Sbjct 38793 GAAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATC 38852
Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554
|| ||||| || || ||| || || | ||||||| ||| | | | | | || ||
Sbjct 38853 CCGATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCT 38912
Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614
|| || |||| | | ||| |||| |||||||| |||| ||| | ||| | ||
Sbjct 38913 TCAATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTA 38972
Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674
| || || | || || ||||| || || || || || ||||| | ||||||
Sbjct 38973 GCTGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTAC 39032
Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734
|| |||| || | || ||||| ||| ||||| | || ||||||||||||||
Sbjct 39033 GTTTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATA 39092
Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794
||||| || | |||| | || || ||||| ||||| || || || ||| | |||
Sbjct 39093 TGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTT 39152
Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847
||||| ||||||||||||||| |||||| || || ||||| ||| | |||||
Sbjct 39153 TTAAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205
>seq13173
Length=15772
Score = 221 bits (244), Expect = 2e-52
Identities = 473/702 (67%), Gaps = 5/702 (1%)
Strand=Plus/Minus
Query 33138 ATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 33196
||| ||||| ||||| || ||| ||||| || |||||||| || || |||||||
Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552
Query 33197 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATC 33256
| || | ||| | || || || || ||||| ||| ||| ||||||| || ||
Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492
Query 33257 TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGC 33316
||| | ||| ||| || | || | | ||| | ||||||| || |||||||
Sbjct 14491 TAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432
Query 33317 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 33376
| || ||||||||||| | ||||| || || || || || || |||||||| || |
Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372
Query 33377 CACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTG 33436
| ||||| || | |||||| || |||||||| ||| ||||||||| ||||| || |
Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312
Query 33437 CAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-TCCACTTTTGAG 33493
| ||||| || |||| | || ||| || ||| || | | | | |||| | |
Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGG 14252
Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553
|||| || ||||| ||||| ||||| || || || ||||| || |||||||
Sbjct 14251 CCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGC 14192
Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613
|| || | ||| | ||| || ||||| | | || |||||||||||||| | ||
Sbjct 14191 GTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGT 14132
Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673
| || ||||| || || || || || ||||| | |||||||| ||||| || || |
Sbjct 14131 TCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGC 14072
Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733
||| ||||| ||| |||||| || || || || || || || || || ||||| |
Sbjct 14071 TAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACA 14012
Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 33793
|||| |||||| | || | || || ||||||||| | || || || |
Sbjct 14011 CATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGG 13952
Query 33794 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835
| | ||| || ||||| || ||||| || ||||| || ||||
Sbjct 13951 ACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622680890072000
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