Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq20705 421 8e-113 seq13173 221 2e-52 >seq20705 Length=54059 Score = 421 bits (466), Expect = 8e-113 Identities = 1220/1853 (66%), Gaps = 36/1853 (2%) Strand=Plus/Plus Query 62016 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 62074 || ||||| || || | || |||||||| ||||| || || || || |||| |||||| Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426 Query 62075 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62134 ||| || || ||||| ||| | || ||||| | || ||||| | || ||||| Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486 Query 62135 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGA-ATTT 62193 |||||| || || || ||||| || |||||||||||||| | | ||| ||| |||| Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545 Query 62194 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 62249 |||| | || || || || || | | | || |||| | | || ||||| Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604 Query 62250 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62309 || |||| || || || ||||| || || |||| ||||| | || || Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664 Query 62310 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62369 ||| ||| || || || |||| |||||||| ||||| ||||| || || | | ||| Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724 Query 62370 TAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62429 ||||||||| || ||||| || | || |||||||| |||| ||||| ||||| ||| Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784 Query 62430 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCT 62489 || || ||||| ||||| | | ||| ||| | || |||| | |||| | || | | Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843 Query 62490 TTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 62548 |||| || | ||| | ||| | ||| | || |||| Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903 Query 62549 AATACCGTTACTGGCGTACGAT-CCTACATATGTATCGTA-TGGTCCT-TCCTTCTCAGC 62605 |||||| ||||| | | | | ||| ||||||| ||||| | | | | | ||| | || Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960 Query 62606 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62665 || || ||||| ||||| | || || |||| || || ||||| |||| || ||||| Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020 Query 62666 ATCTTGTGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCCGCTAA 62722 | ||| || ||| || | ||||| |||||| | | || || || || Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAA 38077 Query 62723 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62782 || ||||||||||| || ||||| | || || || || ||| ||| ||||| | Sbjct 38078 GCCCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAG 38137 Query 62783 AGGATAATAATTAATATCTATAATTTTATTGA-GATTTCTG--ACAATTACTTTGACCAC 62839 ||||||| | || ||||| || ||||| || | | ||| || ||||| ||||| || Sbjct 38138 AGGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-AC 38194 Query 62840 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAAGGCAAC 62896 ||| |||| ||| ||| || || || | |||||||| || | ||| | Sbjct 38195 ATCTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTAT 38254 Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956 || || | || ||||| || | |||| || | | ||| | | || || || || Sbjct 38255 GGAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACA 38314 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 | ||| || || || || ||||| | |||||||||||||| || ||||| | ||| Sbjct 38315 TAAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATC 38374 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076 || | || || |||||||||||||||| | ||||| || || || || ||| | Sbjct 38375 TTTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAG 38434 Query 63077 GACTCGAGCCTTTATTATA-GATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATC 63135 | | || || ||| | |||| | | |||| || || | ||| ||| | | Sbjct 38435 AGATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTT 38493 Query 63136 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 63195 || ||||| ||||||||||||| | || |||||||||| || || |||||||| | Sbjct 38494 TATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATG 38553 Query 63196 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 63254 |||| || | | | | | || || |||||||| ||||| || ||||| | ||| ||| Sbjct 38554 ACCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAG 38612 Query 63255 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63314 || ||||||| || | || |||||| || || || || ||||| | || | || | Sbjct 38613 AAAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCA 38672 Query 63315 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63374 | | || |||||||| ||||| || || || || | | ||||| || || ||| Sbjct 38673 AACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCT 38732 Query 63375 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63434 ||||| || | || | ||| ||| ||| ||||||| | |||||| | | ||| ||| Sbjct 38733 CCCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTT 38792 Query 63435 GATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63494 || | ||||| || || |||| | | || | |||||||| || || Sbjct 38793 GAAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATC 38852 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || ||||| || || ||| || || | ||||||| ||| | | | | | || || Sbjct 38853 CCGATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCT 38912 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || || |||| | | ||| |||| |||||||| |||| ||| | ||| | || Sbjct 38913 TCAATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTA 38972 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 | || || | || || ||||| || || || || || ||||| | |||||| Sbjct 38973 GCTGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTAC 39032 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 || |||| || | || ||||| ||| ||||| | || |||||||||||||| Sbjct 39033 GTTTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATA 39092 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 ||||| || | |||| | || || ||||| ||||| || || || ||| | ||| Sbjct 39093 TGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTT 39152 Query 63795 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 ||||| ||||||||||||||| |||||| || || ||||| ||| | ||||| Sbjct 39153 TTAAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205 >seq13173 Length=15772 Score = 221 bits (244), Expect = 2e-52 Identities = 473/702 (67%), Gaps = 5/702 (1%) Strand=Plus/Minus Query 33138 ATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 33196 ||| ||||| ||||| || ||| ||||| || |||||||| || || ||||||| Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552 Query 33197 CTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATC 33256 | || | ||| | || || || || ||||| ||| ||| ||||||| || || Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATTTCAA 14492 Query 33257 TAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGC 33316 ||| | ||| ||| || | || | | ||| | ||||||| || ||||||| Sbjct 14491 TAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATCGC 14432 Query 33317 AGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 33376 | || ||||||||||| | ||||| || || || || || || |||||||| || | Sbjct 14431 AATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAGAC 14372 Query 33377 CACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTG 33436 | ||||| || | |||||| || |||||||| ||| ||||||||| ||||| || | Sbjct 14371 CGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGACGG 14312 Query 33437 CAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG--CTGTCATGTA-TCCACTTTTGAG 33493 | ||||| || |||| | || ||| || ||| || | | | | |||| | | Sbjct 14311 CGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAGGG 14252 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553 |||| || ||||| ||||| ||||| || || || ||||| || ||||||| Sbjct 14251 CCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTCGC 14192 Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 || || | ||| | ||| || ||||| | | || |||||||||||||| | || Sbjct 14191 GTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCACGT 14132 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 | || ||||| || || || || || ||||| | |||||||| ||||| || || | Sbjct 14131 TCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTGGC 14072 Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 ||| ||||| ||| |||||| || || || || || || || || || ||||| | Sbjct 14071 TAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAACA 14012 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 33793 |||| |||||| | || | || || ||||||||| | || || || | Sbjct 14011 CATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTTGG 13952 Query 33794 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | | ||| || ||||| || ||||| || ||||| || |||| Sbjct 13951 ACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622680890072000