Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq10079 129 6e-25
seq20705 93.3 4e-14
>seq10079
Length=19992
Score = 129 bits (142), Expect = 6e-25
Identities = 209/298 (70%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 71676 ATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCACGGAT 71735
||||||| || ||||| |||| ||| ||||| || || || ||||| || ||||
Sbjct 12959 ATGATGATCTGTGGAACTCTGCGCAGTTGCAGCTGGTAAAGGAAGGCAAAATGCATGGAT 12900
Query 71736 ACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGC 71795
|| || ||||| ||||||||||||||| | || ||||| | || || | || |
Sbjct 12899 TTCTGCGAATGTATTGGGCCAAAAAGATTTTGGAATGGACCGCCTCACCAGAAGAAGCAC 12840
Query 71796 TCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACGGTT 71855
| |||| | | || | |||||||||| ||||| | || || || |||||||| || |
Sbjct 12839 TGGAGTTTACAATATTGCTAAACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGCT 12780
Query 71856 ATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACG-TCAA 71914
| || |||||||||||| ||| | || | || || | ||| ||||| || |
Sbjct 12779 ACGTGGGTTGCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCTA 12720
Query 71915 GTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGTGA 71972
| ||||| || || ||||||||||| | | || ||| ||||||| ||| ||||||
Sbjct 12719 -TCTTTGGAAAGATACGCTATATGAACTATCAGGGGTGCAAACGCAAATTCGATGTGA 12663
>seq20705
Length=54059
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| |||||| | || || || || |||| || || | |||||| | || | ||| |
Sbjct 7090 CATAATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACC 7031
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||||| | |||||| |||||| |||||||| || || ||||| ||
Sbjct 7030 TTCGGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGA 6971
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||||| | || || | | ||||||||| | ||||||| | | | | ||||||
Sbjct 6970 TCAACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTA 6911
Query 26945 TAACATTCAAAAAGAATCTAC 26965
|||||||||||||| |||||
Sbjct 6910 CAACATTCAAAAAGAGTCTAC 6890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478457771824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |