Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq10079 129 6e-25 seq20705 93.3 4e-14 >seq10079 Length=19992 Score = 129 bits (142), Expect = 6e-25 Identities = 209/298 (70%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 71676 ATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCACGGAT 71735 ||||||| || ||||| |||| ||| ||||| || || || ||||| || |||| Sbjct 12959 ATGATGATCTGTGGAACTCTGCGCAGTTGCAGCTGGTAAAGGAAGGCAAAATGCATGGAT 12900 Query 71736 ACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGC 71795 || || ||||| ||||||||||||||| | || ||||| | || || | || | Sbjct 12899 TTCTGCGAATGTATTGGGCCAAAAAGATTTTGGAATGGACCGCCTCACCAGAAGAAGCAC 12840 Query 71796 TCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACGGTT 71855 | |||| | | || | |||||||||| ||||| | || || || |||||||| || | Sbjct 12839 TGGAGTTTACAATATTGCTAAACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGCT 12780 Query 71856 ATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACG-TCAA 71914 | || |||||||||||| ||| | || | || || | ||| ||||| || | Sbjct 12779 ACGTGGGTTGCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCTA 12720 Query 71915 GTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGTGA 71972 | ||||| || || ||||||||||| | | || ||| ||||||| ||| |||||| Sbjct 12719 -TCTTTGGAAAGATACGCTATATGAACTATCAGGGGTGCAAACGCAAATTCGATGTGA 12663 >seq20705 Length=54059 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 || |||||| | || || || || |||| || || | |||||| | || | ||| | Sbjct 7090 CATAATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACC 7031 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||||| | |||||| |||||| |||||||| || || ||||| || Sbjct 7030 TTCGGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGA 6971 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||||| | || || | | ||||||||| | ||||||| | | | | |||||| Sbjct 6970 TCAACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTA 6911 Query 26945 TAACATTCAAAAAGAATCTAC 26965 |||||||||||||| ||||| Sbjct 6910 CAACATTCAAAAAGAGTCTAC 6890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478457771824000