Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 223 9e-53
seq13173 102 2e-16
>seq20705
Length=54059
Score = 223 bits (246), Expect = 9e-53
Identities = 581/882 (66%), Gaps = 8/882 (1%)
Strand=Plus/Minus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
|| ||||| | |||| ||||||||| |||||||||||||||||||| || ||||| ||
Sbjct 39124 ATAAATGGGAAAATTGCTGAACGCCCACAGCATATGTTAATGCGTGTGGCCATTGGAATA 39065
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549
||| || ||| | ||||| || ||||||| || || | || | || |||
Sbjct 39064 CATGGCGAAGATATCGATGCGGCAGTTGAAACGTACAACTTGCTTTCCGAGCGATATTTC 39005
Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC---CACAGATGTCTTCT 363606
|| || || |||||||| | | | || | | || |||| | || |||| ||
Sbjct 39004 ACCCATGCTTCGCCAACACTTTTC---GCGGCAGCTACAAATCGGCCGCAACTGTCGTCG 38948
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
|| |||||||| | ||| || ||||| || || || || ||| | | | | |
Sbjct 38947 TGTTTTCTTCTTACGATGGTGGCTGATTCAATTGAAGGAATATTTAAATCCGTCGAACAA 38888
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726
|| || | || ||||| || || ||||| || || | ||| |||||||
Sbjct 38887 TGCGCAATGATATCCAAATCAGCTGGTGGAATCGGGATAAACGTTCACTGCATTCGTGCT 38828
Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786
| | || || | || || ||| || ||||| |||| || ||||| |
Sbjct 38827 AAAGGTACTTCGATCTGTGGAACTAATGGAACTTCAAATGGTTTGGTGCCAATGCTAAGA 38768
Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846
|| ||| |||| || | || || |||||||| || |||||||| || || |||
Sbjct 38767 GTTTTTAACAACGTGGCTCGCTATGTTGACCAGGGAGGTGGAAAGCGTCCTGGTGCCTTT 38708
Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906
|| || ||| | || ||| ||| | || | ||||| ||| | || | ||||||
Sbjct 38707 GCAATTTATTTAGAACCTTGGCATTCAGACGTGTTTGAATTTTTAGACTTAAAAAAAAAC 38648
Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966
|| || || |||||| ||||| || ||||| |||||||| | ||| | | || | |
Sbjct 38647 ACTGGCAAGGAGGAAAATCGTGCCCGAGATCTTTTCTATGCTTTATGGATACCAGATCTT 38588
Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026
||||||||||| || || || | || |||||||| | | |||||||| |||||||
Sbjct 38587 TTTATGAAGCGTGTTGAAGCTAATGAGGATTGGTCATTGATGTGCCCACATAAATGTCCT 38528
Query 364027 GGTCTTTC-CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085
|| ||| | ||||| ||||| || || | || | || || | || |||||| |||
Sbjct 38527 GG-CTTACATGATGTTTGGGGAGAAGAGTTTGATAAACTCTATGTCAAATATGAACAGGA 38469
Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
|| ||| | |||||| || || || |||||||| || || || || ||
Sbjct 38468 AGGCCGTGCTAATCGAACAATTAAAGCGCAATCTCTGTGGTTTGCTATAATTGAGTCTCA 38409
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
| || || || || || |||||| ||| ||||||||| || || ||||| || ||
Sbjct 38408 AGTAGAAACTGGTACTCCATATATGCTGTTCAAAGATTCCTGTAATCGCAAAAGTAATCA 38349
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265
|| || |||| || ||| | ||||| |||||||||| ||| | || || ||||
Sbjct 38348 ACAAAACGTTGGAACCATTAAATGCAGCAATTTATGTACCGAAATTGTGGAGTATTCCGC 38289
Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307
|| || || | ||| || || ||| | || || || || ||
Sbjct 38288 CCCTGATGAAATTGCTGTTTGCAACTTAGCTTCCATAGCCCT 38247
Score = 105 bits (116), Expect = 2e-17
Identities = 344/525 (66%), Gaps = 32/525 (6%)
Strand=Plus/Minus
Query 364648 TTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT---- 364703
|| |||| ||| | |||||| || ||| | | |||| ||||| |||| ||
Sbjct 37903 TTACAGTATGACATGTGGAATAAAACTCCAACAGATTTATGGGACTGGAATACACTTAAA 37844
Query 364704 ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCAC 364763
|||| ||| ||||||| || || |||||| || | ||| || || ||||| ||
Sbjct 37843 ACGT--CAA--TTAAGAAACACGGCGTTCGCAATTCTTTGCTTATTGCACCAATGCCTAC 37788
Query 364764 GGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCT 364823
|| || ||||| || || | || || || || | |||||| |||| ||| ||| |
Sbjct 37787 AGCATCCACTGCCCAAATAATGGGTAATAATGAATCCTTCGAGCCGTACACATCTAATAT 37728
Query 364824 TTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGA 364883
||| | | ||||| | || || ||||| | ||||| ||| | ||||| | ||
Sbjct 37727 TTACACCAGACGGGTGTTATCTGGTGAATTCCAAGTAGTAAATCATCACCTACTACGAGA 37668
Query 364884 TCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC----GCCGCTA 364939
| | | || | || |||| |||| |||||||||| | || || ||||
Sbjct 37667 TTTGACAGAATTGGACCTATGGGATGACGACATGAAGAACCAAATAATATCAAGCCG--- 37611
Query 364940 ATGGTTCTGTGCAGAACATTCCAGGATT----TCCAGAAGA--TCTGAAGCCTATTTACA 364993
||||||| | || |||||| |||| ||| || | || || | || | ||||
Sbjct 37610 -TGGTTCTATTCAAAACATT----GATTCTATTCCTCAACACGTCCGA-GACT-TGTACA 37558
Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053
| |||||||||||||| ||| | | | || | ||||| || ||| | |||||||
Sbjct 37557 AGACCGTATGGGAAATCTCCGTTAAATCAACAATAAAAATGGCTGCTGATAGGGGTGCTT 37498
Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAAGCT 365111
|||| ||| || ||||| ||||| |||||| || | |||| | || | || ||
Sbjct 37497 TTATAGATCAAAGTCAGTCCTTTAA--TATTCACGTGGCAGAGCCCAACTATGGAAAACT 37440
Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| || || ||||| ||| ||||| | || ||||| |||||
Sbjct 37439 GACTTCGATACATTTTTACTCATGGAAGGCTGGGCTTAAAACAGG 37395
>seq13173
Length=15772
Score = 102 bits (112), Expect = 2e-16
Identities = 116/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGG-AGCATTTTGTGC 22547
||||| |||| || ||||| | || |||||||| |||||| ||| ||| || | |
Sbjct 14290 GAACGCATTATAGCTTTTGCCGCCGTCGAAGGCATCTTCTTTAGTGGCAGC-TTCGCTTC 14348
Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607
|||||||||| | || || || | ||||||| ||||| || || ||||||||||||||
Sbjct 14349 AATCTTTTGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCAAATGAGTTAAT 14408
Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGC 22640
| || || |||||||| ||| |||||||||
Sbjct 14409 TTCACGCGACGAGGGTCTACATTGCGATTTTGC 14441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302782486744400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |