Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq20705 223 9e-53 seq13173 102 2e-16 >seq20705 Length=54059 Score = 223 bits (246), Expect = 9e-53 Identities = 581/882 (66%), Gaps = 8/882 (1%) Strand=Plus/Minus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 || ||||| | |||| ||||||||| |||||||||||||||||||| || ||||| || Sbjct 39124 ATAAATGGGAAAATTGCTGAACGCCCACAGCATATGTTAATGCGTGTGGCCATTGGAATA 39065 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| || ||| | ||||| || ||||||| || || | || | || ||| Sbjct 39064 CATGGCGAAGATATCGATGCGGCAGTTGAAACGTACAACTTGCTTTCCGAGCGATATTTC 39005 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATC---CACAGATGTCTTCT 363606 || || || |||||||| | | | || | | || |||| | || |||| || Sbjct 39004 ACCCATGCTTCGCCAACACTTTTC---GCGGCAGCTACAAATCGGCCGCAACTGTCGTCG 38948 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || |||||||| | ||| || ||||| || || || || ||| | | | | | Sbjct 38947 TGTTTTCTTCTTACGATGGTGGCTGATTCAATTGAAGGAATATTTAAATCCGTCGAACAA 38888 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || | || ||||| || || ||||| || || | ||| ||||||| Sbjct 38887 TGCGCAATGATATCCAAATCAGCTGGTGGAATCGGGATAAACGTTCACTGCATTCGTGCT 38828 Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786 | | || || | || || ||| || ||||| |||| || ||||| | Sbjct 38827 AAAGGTACTTCGATCTGTGGAACTAATGGAACTTCAAATGGTTTGGTGCCAATGCTAAGA 38768 Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTT 363846 || ||| |||| || | || || |||||||| || |||||||| || || ||| Sbjct 38767 GTTTTTAACAACGTGGCTCGCTATGTTGACCAGGGAGGTGGAAAGCGTCCTGGTGCCTTT 38708 Query 363847 GCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC 363906 || || ||| | || ||| ||| | || | ||||| ||| | || | |||||| Sbjct 38707 GCAATTTATTTAGAACCTTGGCATTCAGACGTGTTTGAATTTTTAGACTTAAAAAAAAAC 38648 Query 363907 ACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCAT 363966 || || || |||||| ||||| || ||||| |||||||| | ||| | | || | | Sbjct 38647 ACTGGCAAGGAGGAAAATCGTGCCCGAGATCTTTTCTATGCTTTATGGATACCAGATCTT 38588 Query 363967 TTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCA 364026 ||||||||||| || || || | || |||||||| | | |||||||| ||||||| Sbjct 38587 TTTATGAAGCGTGTTGAAGCTAATGAGGATTGGTCATTGATGTGCCCACATAAATGTCCT 38528 Query 364027 GGTCTTTC-CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || ||| | ||||| ||||| || || | || | || || | || |||||| ||| Sbjct 38527 GG-CTTACATGATGTTTGGGGAGAAGAGTTTGATAAACTCTATGTCAAATATGAACAGGA 38469 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 || ||| | |||||| || || || |||||||| || || || || || Sbjct 38468 AGGCCGTGCTAATCGAACAATTAAAGCGCAATCTCTGTGGTTTGCTATAATTGAGTCTCA 38409 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | || || || || || |||||| ||| ||||||||| || || ||||| || || Sbjct 38408 AGTAGAAACTGGTACTCCATATATGCTGTTCAAAGATTCCTGTAATCGCAAAAGTAATCA 38349 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 || || |||| || ||| | ||||| |||||||||| ||| | || || |||| Sbjct 38348 ACAAAACGTTGGAACCATTAAATGCAGCAATTTATGTACCGAAATTGTGGAGTATTCCGC 38289 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCT 364307 || || || | ||| || || ||| | || || || || || Sbjct 38288 CCCTGATGAAATTGCTGTTTGCAACTTAGCTTCCATAGCCCT 38247 Score = 105 bits (116), Expect = 2e-17 Identities = 344/525 (66%), Gaps = 32/525 (6%) Strand=Plus/Minus Query 364648 TTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT---- 364703 || |||| ||| | |||||| || ||| | | |||| ||||| |||| || Sbjct 37903 TTACAGTATGACATGTGGAATAAAACTCCAACAGATTTATGGGACTGGAATACACTTAAA 37844 Query 364704 ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCAC 364763 |||| ||| ||||||| || || |||||| || | ||| || || ||||| || Sbjct 37843 ACGT--CAA--TTAAGAAACACGGCGTTCGCAATTCTTTGCTTATTGCACCAATGCCTAC 37788 Query 364764 GGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCT 364823 || || ||||| || || | || || || || | |||||| |||| ||| ||| | Sbjct 37787 AGCATCCACTGCCCAAATAATGGGTAATAATGAATCCTTCGAGCCGTACACATCTAATAT 37728 Query 364824 TTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGA 364883 ||| | | ||||| | || || ||||| | ||||| ||| | ||||| | || Sbjct 37727 TTACACCAGACGGGTGTTATCTGGTGAATTCCAAGTAGTAAATCATCACCTACTACGAGA 37668 Query 364884 TCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC----GCCGCTA 364939 | | | || | || |||| |||| |||||||||| | || || |||| Sbjct 37667 TTTGACAGAATTGGACCTATGGGATGACGACATGAAGAACCAAATAATATCAAGCCG--- 37611 Query 364940 ATGGTTCTGTGCAGAACATTCCAGGATT----TCCAGAAGA--TCTGAAGCCTATTTACA 364993 ||||||| | || |||||| |||| ||| || | || || | || | |||| Sbjct 37610 -TGGTTCTATTCAAAACATT----GATTCTATTCCTCAACACGTCCGA-GACT-TGTACA 37558 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053 | |||||||||||||| ||| | | | || | ||||| || ||| | ||||||| Sbjct 37557 AGACCGTATGGGAAATCTCCGTTAAATCAACAATAAAAATGGCTGCTGATAGGGGTGCTT 37498 Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCA--TGACTCAGCCAACCTCCGCCAAGCT 365111 |||| ||| || ||||| ||||| |||||| || | |||| | || | || || Sbjct 37497 TTATAGATCAAAGTCAGTCCTTTAA--TATTCACGTGGCAGAGCCCAACTATGGAAAACT 37440 Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 || || || ||||| ||| ||||| | || ||||| ||||| Sbjct 37439 GACTTCGATACATTTTTACTCATGGAAGGCTGGGCTTAAAACAGG 37395 >seq13173 Length=15772 Score = 102 bits (112), Expect = 2e-16 Identities = 116/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGG-AGCATTTTGTGC 22547 ||||| |||| || ||||| | || |||||||| |||||| ||| ||| || | | Sbjct 14290 GAACGCATTATAGCTTTTGCCGCCGTCGAAGGCATCTTCTTTAGTGGCAGC-TTCGCTTC 14348 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 |||||||||| | || || || | ||||||| ||||| || || |||||||||||||| Sbjct 14349 AATCTTTTGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCAAATGAGTTAAT 14408 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGC 22640 | || || |||||||| ||| ||||||||| Sbjct 14409 TTCACGCGACGAGGGTCTACATTGCGATTTTGC 14441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302782486744400