Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq20705 84.2 2e-11 >seq20705 Length=54059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 || |||||| | || || || || |||| || || | || ||| | || ||||| | Sbjct 7090 CATAATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACC 7031 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || || ||||| | |||||| |||||| |||||||| || || ||||| || Sbjct 7030 TTCGGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGA 6971 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | ||||| | | ||||| ||| | ||||||| | | | ||| || Sbjct 6970 TCAACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTA 6911 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 |||||||||||||| |||||| | || || ||| Sbjct 6910 CAACATTCAAAAAGAGTCTACATTGCACTTGGTG 6877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429756797301000