Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 149 6e-31
seq30232 141 9e-29
>seq20705
Length=54059
Score = 149 bits (164), Expect = 6e-31
Identities = 487/745 (65%), Gaps = 19/745 (3%)
Strand=Plus/Plus
Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGAC----GCAAATACACGTTAGACGT 145110
||||| || || || || || || | ||||| || | | ||||| ||||| ||
Sbjct 37683 TGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATA----TTAGATGT 37738
Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170
| | || || || || || ||||| |||| ||||| || || | ||| || |||||
Sbjct 37739 GTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGG 37798
Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGAT-GTCTTCCTTTAGCGTACCCC 145229
|| | | || |||||||| | |||||| ||||| || | | | || || ||| ||
Sbjct 37799 TGCAATAAGCAAAGAATTGCGAACGCCGTGTTTCTTAATTGACGTT-TTAAGTGTATTCC 37857
Query 145230 AATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGG 145289
| ||||||| || || | | ||||||||| ||||| ||||| || | ||
Sbjct 37858 AGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCA 37917
Query 145290 CGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTG-GCGAGCTCGCAACTCGC 145347
| |||||||||| | | | ||| ||| | ||| ||| |||||||||||||| ||
Sbjct 37918 CTGGGCTGCCTTCATATGTTTCGTAGTAGCC--ATGTTCTTGTGCGAGCTCGCAACTTGC 37975
Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407
||| || || || ||||| ||||||||| ||| ||| ||| || || || |||||
Sbjct 37976 CTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATC 38035
Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
||| ||||| || |||| | | | |||||||| | ||||| | || | ||
Sbjct 38036 GCTTTCGTAAGGATACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCC 38095
Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGT 145526
|| || || || | | ||| | | ||| || | | |||||| || |
Sbjct 38096 AATAGGACGGTGCCTTAAGTTCGATTTTTTAGCC-TCTGGTAGAGGATAAAAGTTGATAT 38154
Query 145527 CGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGT 145586
| || ||||| ||||||||| || | |||||| | | ||| |||| |||||
Sbjct 38155 CAATTATTTTGTTCAAGTTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGT 38214
Query 145587 CAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646
| | ||| | || || ||| |||||| ||| || || || || || ||||
Sbjct 38215 CGTATTTTTTTTCGGGAGTGA-CAAACA--TATTGAGGGCTATGGAAGCTAAGTTGCAAA 38271
Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706
| || | || || | | || || | || || |||| || |||||||| ||||| |
Sbjct 38272 CAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAA 38331
Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766
||||||| | ||||| ||||||||||| | || || | || ||| | ||||| || |
Sbjct 38332 TGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATG 38391
Query 145767 GTCCGCCAGTCTCCACCTGCGTCTC 145791
| ||||| || || || | |||
Sbjct 38392 GAGTACCAGTTTCTACTTGAGACTC 38416
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| || || | || ||||| |||||||||||||| ||| |
Sbjct 6860 CCACCACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGAC 6919
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || | || ||||| || |||| | ||| || || || |||||
Sbjct 6920 AGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGA 6979
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||||| |||||||| ||| | | || |||| | || | ||||| | | ||||
Sbjct 6980 ATTCCCTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGAC 7038
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || ||||| || || ||||||||||||||
Sbjct 7039 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCAT 7086
>seq30232
Length=15380
Score = 141 bits (156), Expect = 9e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||||||| ||||| || || | || |||||||| || |||||||| |||
Sbjct 14875 GCCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 14934
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| |||||| ||||||||||| ||| |||| ||||||||||| || || ||
Sbjct 14935 CAAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 14994
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||| | | ||| | ||||| | || ||| |
Sbjct 14995 AATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15054
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || | || || ||||| ||||||||
Sbjct 15055 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| ||||| | || |||||||| || |||||||| ||| |
Sbjct 15104 CCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 15163
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| ||| |||| ||||||||||| || || ||
Sbjct 15164 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 15223
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | ||| | ||||| | || ||| |
Sbjct 15224 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACT 15283
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || | || || ||||| ||||||||
Sbjct 15284 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471811014528000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |