Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq20705 149 6e-31 seq30232 141 9e-29 >seq20705 Length=54059 Score = 149 bits (164), Expect = 6e-31 Identities = 487/745 (65%), Gaps = 19/745 (3%) Strand=Plus/Plus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGAC----GCAAATACACGTTAGACGT 145110 ||||| || || || || || || | ||||| || | | ||||| ||||| || Sbjct 37683 TGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATA----TTAGATGT 37738 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 | | || || || || || ||||| |||| ||||| || || | ||| || ||||| Sbjct 37739 GTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGG 37798 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGAT-GTCTTCCTTTAGCGTACCCC 145229 || | | || |||||||| | |||||| ||||| || | | | || || ||| || Sbjct 37799 TGCAATAAGCAAAGAATTGCGAACGCCGTGTTTCTTAATTGACGTT-TTAAGTGTATTCC 37857 Query 145230 AATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGG 145289 | ||||||| || || | | ||||||||| ||||| ||||| || | || Sbjct 37858 AGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCA 37917 Query 145290 CGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTG-GCGAGCTCGCAACTCGC 145347 | |||||||||| | | | ||| ||| | ||| ||| |||||||||||||| || Sbjct 37918 CTGGGCTGCCTTCATATGTTTCGTAGTAGCC--ATGTTCTTGTGCGAGCTCGCAACTTGC 37975 Query 145348 CTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATC 145407 ||| || || || ||||| ||||||||| ||| ||| ||| || || || ||||| Sbjct 37976 CTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATC 38035 Query 145408 GCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467 ||| ||||| || |||| | | | |||||||| | ||||| | || | || Sbjct 38036 GCTTTCGTAAGGATACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCC 38095 Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGT 145526 || || || || | | ||| | | ||| || | | |||||| || | Sbjct 38096 AATAGGACGGTGCCTTAAGTTCGATTTTTTAGCC-TCTGGTAGAGGATAAAAGTTGATAT 38154 Query 145527 CGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGT 145586 | || ||||| ||||||||| || | |||||| | | ||| |||| ||||| Sbjct 38155 CAATTATTTTGTTCAAGTTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGT 38214 Query 145587 CAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAA 145646 | | ||| | || || ||| |||||| ||| || || || || || |||| Sbjct 38215 CGTATTTTTTTTCGGGAGTGA-CAAACA--TATTGAGGGCTATGGAAGCTAAGTTGCAAA 38271 Query 145647 CTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGA 145706 | || | || || | | || || | || || |||| || |||||||| ||||| | Sbjct 38272 CAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAA 38331 Query 145707 TGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACG 145766 ||||||| | ||||| ||||||||||| | || || | || ||| | ||||| || | Sbjct 38332 TGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATG 38391 Query 145767 GTCCGCCAGTCTCCACCTGCGTCTC 145791 | ||||| || || || | ||| Sbjct 38392 GAGTACCAGTTTCTACTTGAGACTC 38416 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| || || | || ||||| |||||||||||||| ||| | Sbjct 6860 CCACCACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGAC 6919 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || | || ||||| || |||| | ||| || || || ||||| Sbjct 6920 AGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGA 6979 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| |||||||| ||| | | || |||| | || | ||||| | | |||| Sbjct 6980 ATTCCCTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGAC 7038 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || ||||| || || |||||||||||||| Sbjct 7039 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCAT 7086 >seq30232 Length=15380 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||||||||| ||||| || || | || |||||||| || |||||||| ||| Sbjct 14875 GCCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 14934 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 14935 CAAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 14994 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | ||| | ||||| | || ||| | Sbjct 14995 AATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15054 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || | || || ||||| |||||||| Sbjct 15055 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | || |||||||| || |||||||| ||| | Sbjct 15104 CCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 15163 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| ||||||||||| || || || Sbjct 15164 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 15223 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | ||| | ||||| | || ||| | Sbjct 15224 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACT 15283 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || | || || ||||| |||||||| Sbjct 15284 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471811014528000