Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq20705 417 1e-111 seq13173 201 1e-46 >seq20705 Length=54059 Score = 417 bits (462), Expect = 1e-111 Identities = 1219/1853 (66%), Gaps = 36/1853 (2%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 61929 || ||||| || || | || |||||||| ||||| || || || || |||| |||||| Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAGCCC-AGCCTTCCATGAGTAAAA 37426 Query 61930 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 61989 ||| || || ||||| ||| | || ||||| | || ||||| | || ||||| Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486 Query 61990 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGA-ATTT 62048 |||||| || || || ||||| || |||||||||||||| | | ||| ||| |||| Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTATTGTTGA-TTTAACGGAGATTT 37545 Query 62049 CCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGG---TTTGTATTCTGAATG 62104 |||| | || || || || || | | | || |||| | | || ||||| Sbjct 37546 CCCATACGGTCTTGTACAAGTCTCGGACG-TGTTGAGGAATAGAATCAATGTTTTGAATA 37604 Query 62105 GATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTT 62164 || |||| || || || ||||| || || |||| ||||| | || || Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664 Query 62165 AAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTG 62224 ||| ||| || || || |||| |||||||| ||||| ||||| || || | | ||| Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724 Query 62225 TAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGAT 62284 ||||||||| || ||||| || | || |||||||| |||| ||||| ||||| ||| Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784 Query 62285 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCT 62344 || || ||||| ||||| | | ||| ||| | || |||| | |||| | || | | Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843 Query 62345 TTTAGAGGT-TCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAG 62403 |||| || | ||| | ||| | ||| | || |||| Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903 Query 62404 AATACCGTTACTGGCGTACGAT-CCTACATATGTATCGTA-TGGTCCT-TCCTTCTCAGC 62460 |||||| ||||| | | | | ||| ||||||| ||||| | | | | | ||| | || Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960 Query 62461 TAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAG 62520 || || ||||| ||||| | || || |||| || || ||||| |||| || ||||| Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020 Query 62521 ATCTTGCGCTTCCAGGCTATCAAATGGATAAT---TTAAGAGAATAAACGCGTCTGCTAA 62577 | || || ||| || | ||||| |||||| | | || || || || Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGA---TCAGTGCATCGGCAAA 38077 Query 62578 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAAT 62637 || ||||||||||| || ||||| | || || || || ||| ||| ||||| | Sbjct 38078 GCCCTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAG 38137 Query 62638 AGGATAATAATTAATATCTATAATTTTATTGA-GATTTCTG--ACAATTACTTTGACCAC 62694 ||||||| | || ||||| || ||||| || | | ||| || ||||| ||||| || Sbjct 38138 AGGATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAAT--CTTTGTT-AC 38194 Query 62695 ATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA---TTACAAACATGTTCAATGCAAC 62751 ||| |||| ||| ||| || || || | |||||||| || | || | Sbjct 38195 ATCTTTCAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTAT 38254 Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811 || || | || ||||| || | |||| || | | ||| | | || || || || Sbjct 38255 GGAAGCTAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACA 38314 Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871 | ||| || || || |||||||| | |||||||||||||| || ||||| | ||| Sbjct 38315 TAAATTGCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATC 38374 Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931 || | || || |||||||||||||||| | ||||| || || || || ||| | Sbjct 38375 TTTGAACAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAG 38434 Query 62932 GACTCGAGCCTTTATTATA-GATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATC 62990 | | || || ||| | |||| | | | || || || | ||| ||| | | Sbjct 38435 AGATTGCGCTTTAATTGTTCGATTAGCACGGCCTTCCTGTT-CATATTTGACATAGAGTT 38493 Query 62991 GTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACG 63050 || ||||| ||||||||||||| | | |||||||||| || || |||||||| | Sbjct 38494 TATCAAACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATG 38553 Query 63051 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA- 63109 |||| || | | | | | || || |||||||| ||||| || ||||| | ||| ||| Sbjct 38554 ACCAATCCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGC-ATAG 38612 Query 63110 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63169 || ||||||| || | || |||||| || || || || ||||| | || | || | Sbjct 38613 AAAAGATCTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCA 38672 Query 63170 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229 | | || |||||||| ||||| || || || || | | ||||| || || ||| Sbjct 38673 AACACGTCTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCT 38732 Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289 ||||| || | || | ||| ||| ||| ||||||| | |||||| | | |||||| Sbjct 38733 CCCTGGTCAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTT 38792 Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGA 63349 || || ||||| || || |||| | | || | |||||||| || || Sbjct 38793 GAAGTTCCATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATC 38852 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || ||||| || || ||| || || | ||||||| ||| | | | | | || || Sbjct 38853 CCGATTCCACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCT 38912 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || || |||| ||| ||| |||| |||||||| |||| ||| | ||| | || Sbjct 38913 TCAATTGAATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTA 38972 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 | || || | || || ||||| || || || || || ||||| | |||||| Sbjct 38973 GCTGCCGCGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTAC 39032 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63589 || |||| || | || ||||| ||| ||||| | || |||||||||||||| Sbjct 39033 GTTTCAACTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATA 39092 Query 63590 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63649 ||||| || | |||| | || || ||||| ||||| || || || ||| | ||| Sbjct 39093 TGCTGTGGGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTT 39152 Query 63650 TTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 ||||| ||||||||||||||| |||||| || || ||||| ||| | ||||| Sbjct 39153 TTAAATCCAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTT 39205 >seq13173 Length=15772 Score = 201 bits (222), Expect = 1e-46 Identities = 472/704 (67%), Gaps = 9/704 (1%) Strand=Plus/Minus Query 32495 ATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT-AAGTTTAA 32553 ||| ||||||||||| || ||| ||||| || |||||||| || || ||||||| Sbjct 14610 ATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAATTAAGTTTA- 14552 Query 32554 CTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATC 32613 | || | ||| | || || || || ||||| || || || |||| || || || Sbjct 14551 CGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTGAAATGATT--TC 14494 Query 32614 T-TACTGT-TTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATC 32671 || || ||| ||| || | | | | ||| | ||||||| || ||||| Sbjct 14493 AATAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATCAGCACGGCAAAATC 14434 Query 32672 GCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAG 32731 ||| |||||||||||||| | |||||| || || || || || || |||||||| || Sbjct 14433 GCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCGGGCATAAG 14374 Query 32732 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTAC 32791 || ||||| || | |||||| || || || || ||| |||||| || ||||| || Sbjct 14373 ACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATGCCTTCGAC 14314 Query 32792 TGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--GCTGTCATG-TATCCACTTTTG 32848 || ||||| || |||| | || ||| || ||| || | | | ||||| | Sbjct 14313 GGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGAAGAAATCCAAGCGAG 14254 Query 32849 AGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 32908 ||||| || ||||| ||||| ||||| ||||| || ||||| || ||||||| Sbjct 14253 GGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGAAAAGATAGTC 14194 Query 32909 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 32968 || || | ||| | ||| || || || | | || |||||||||||||| | Sbjct 14193 GCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTTCCGAATGCAC 14134 Query 32969 GTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT 33028 ||| || ||||| ||||| || || || || || | |||||||| ||||| || || Sbjct 14133 GTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCTGCACCTCCTG 14074 Query 33029 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33088 | ||| |||||| | | |||||| || || || || || || || || || ||||| Sbjct 14073 GCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGAAGAATGCCAA 14014 Query 33089 TACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTT 33148 ||||| |||||| | || | || || ||||||||| | || || || Sbjct 14013 CACATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTGTCATGTCCTT 13954 Query 33149 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 || | |||||| ||||| || ||||| || ||||| || |||| Sbjct 13953 GGACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGGCCT 13910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633361122320000