Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 212 5e-50
seq30232 116 3e-21
seq13173 82.4 6e-11
>seq20705
Length=54059
Score = 212 bits (234), Expect = 5e-50
Identities = 711/1092 (65%), Gaps = 21/1092 (2%)
Strand=Plus/Plus
Query 128773 TGCGACTT--GTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGT 128830
|||||||| ||| || ||||| | |||||||| || || || || || ||||| || |
Sbjct 37330 TGCGACTTTTGTCAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAAT 37389
Query 128831 ACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGT 128890
|||| |||||||| | || ||||| | || | || |||| |||| | | |
Sbjct 37390 ACATTCCTGTTTTAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCAT 37449
Query 128891 AGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGAT 128950
|| |||| | || ||||||||| || ||||||||||| ||||| | || | ||
Sbjct 37450 AGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTAT 37509
Query 128951 CGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTC 129010
| |||||||| || ||| || |||||||| || || ||||| | ||||
Sbjct 37510 CAGCAGCCATTTTTATTGTTGATTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTC 37569
Query 129011 TCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGT 129070
||||||| || || |||||||| || | || | ||| || |||| ||
Sbjct 37570 GGACGTGTTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGT 37629
Query 129071 TTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCG--GTCAAGTATTTGTT 129128
| ||| | || | | | | || || ||||||| ||| || | || | ||
Sbjct 37630 TCTTCATGTCGTCATCCCATAGGTCCAATTCTGTCAAATC-TCGTAGT-AGGTGATGATT 37687
Query 129129 TATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTC 129188
|| |||||| || ||||| | || || || | |||||| || ||| |||||||
Sbjct 37688 TACTACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTC 37747
Query 129189 AAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCAC--G 129246
|| |||||||| || || | |||||| || || | || || ||||| || | |
Sbjct 37748 GAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAG 37807
Query 129247 CAAAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGT-CCAGTCCCA 129305
||||| | || || | ||||| | ||||| | |||||| ||| | |||||||||
Sbjct 37808 CAAAG--AATTGCGAACGCCGTGTTTCTTAAT-TGACGTTTTAAGTGTATTCCAGTCCCA 37864
Query 129306 CATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGACT 129365
| ||| || || | |||||||| ||| || || || ||||| ||| | || ||
Sbjct 37865 TAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGGCT 37924
Query 129366 GGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGC 129425
| || | |||| ||| | ||| ||| | |||||||| || || | ||
Sbjct 37925 GCCTTCATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGC 37984
Query 129426 GCCAAAATAAATTGTTTCGGCAATTT--TGGTGTTCAACACTTTGGCCTGGTCGCTTTCG 129483
|||||||| ||||| ||| ||| | |||| | || | | |||| |||||||||
Sbjct 37985 TCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGAT--GCCTCATCGCTTTCG 38042
Query 129484 TACGGCATA-CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGG 129542
|| || ||| |||| | | | || ||||| || || |||| ||| | || || ||
Sbjct 38043 TAAGG-ATACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGG 38101
Query 129543 TCGATGTTTTCTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAAT 129602
|| || || || ||||||| ||| | ||||| ||||||| || || ||
Sbjct 38102 ACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTAT 38161
Query 129603 TTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACTC 129662
|||||| || || || ||||| || ||||| | ||| || ||| ||| | ||| |
Sbjct 38162 TTTGTTCAAGTTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGTCGTATT- 38220
Query 129663 GCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACT 129722
| ||| |||||| ||||| || || || || ||||| || ||| |
Sbjct 38221 --TTTTTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAAT 38278
Query 129723 TTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCC 129782
||| | | | ||||| |||||||||| || ||||| || ||||||||| ||
Sbjct 38279 TTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCC 38338
Query 129783 CAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCC 129842
| | | |||||||||||| || || | ||||||| ||| ||| || || || ||
Sbjct 38339 AACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACC 38398
Query 129843 CGTTTCGACTTG 129854
||||| |||||
Sbjct 38399 AGTTTCTACTTG 38410
Score = 143 bits (158), Expect = 2e-29
Identities = 150/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| ||||| || |||| || || || |||| ||||| || ||| | |
Sbjct 7086 ATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTCG 7027
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || ||||| || ||||| ||||| ||||| ||||| || ||||||
Sbjct 7026 GATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 6967
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| |||||||| || || ||| ||||| | ||||| ||||||
Sbjct 6966 CAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAAC 6907
Query 22399 ATTCAAAAAGAATCCAC 22415
||||||||||| || ||
Sbjct 6906 ATTCAAAAAGAGTCTAC 6890
>seq30232
Length=15380
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || ||||||| |||||||| || |
Sbjct 15102 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15043
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | || || || ||||||||||| || ||||| || |||||
Sbjct 15042 GATACCATTGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAG 14983
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || ||||| ||| | ||||| ||||| | ||||| ||||||
Sbjct 14982 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTTTGTCCGACTACAAC 14923
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || ||||| | || || || | || |||||||| ||
Sbjct 14922 ATCCAGAAGGAGTCCACATTGCACTTGGTGCTCCGTTTGCGCGGTGG 14876
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || || || || || || ||||||| |||||||| || |
Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | || || | || || |||||||||||||| || ||||| || |||||
Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||| | || || || ||||| ||| | ||||| ||||| | ||||| ||||||
Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 15151
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| || || || ||||| | ||||| ||
Sbjct 15150 ATCCAGAAGGAGTCCACTTTGCATTTGGT 15122
>seq13173
Length=15772
Score = 82.4 bits (90), Expect = 6e-11
Identities = 112/155 (72%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 117059 ACGCATGATCGCTTTCGCCATTGTCGAAGGCATTTTCTTTTCAGGCAGTTTTGCTGCCAT 117118
|||||| || ||||| ||| ||||||||||| |||||| ||||| || ||| | ||
Sbjct 14292 ACGCATTATAGCTTTTGCCGCCGTCGAAGGCATCTTCTTTAGTGGCAGCTTCGCTTCAAT 14351
Query 117119 ATTTTTTATCAAGACCAAAGGTCTAATGCCGGGTCTAACGTTTAGCAACGAATTAATATC 117178
|||| | |||| ||||| ||||| ||||| || || || || ||||| ||
Sbjct 14352 CTTTTGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCAAATGAGTTAATTTC 14411
Query 117179 GCGTGACGAAGGTTTACACACCGATTTTG-CGTGC 117212
|| ||||| ||| |||| |||||||| |||||
Sbjct 14412 ACGCGACGAGGGTCTACATTGCGATTTTGCCGTGC 14446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419553052123000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |