Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq20705 165 2e-35 seq30232 149 1e-30 >seq20705 Length=54059 Score = 165 bits (182), Expect = 2e-35 Identities = 175/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| | || ||||||||||| ||||| || ||||| Sbjct 6860 CCACCACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGAC 6919 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| || || || || || || || || | |||||| || || ||| Sbjct 6920 AGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGA 6979 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || ||||| |||||||| || ||||| ||||| || || | | ||| || Sbjct 6980 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACC 7039 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||| || ||||| |||||||| ||||| |||||||||||| Sbjct 7040 TCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCATTATG 7090 >seq30232 Length=15380 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| | || | |||||||| | |||||||| || |||||||| || ||||| Sbjct 14876 CCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 14935 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| || ||||| || | | || || || || ||| Sbjct 14936 AAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 14995 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| ||||| || ||| ||||| |||| | || ||| Sbjct 14996 ATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACT 15055 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || | |||||||||||| |||||||| Sbjct 15056 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || | |||||||| || |||||||| || ||||| Sbjct 15104 CCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 15163 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || | | || || || || ||| Sbjct 15164 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 15223 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||||||||| ||||| || ||| ||||| |||| | || ||| Sbjct 15224 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACT 15283 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || || | |||||| ||||| |||||||| Sbjct 15284 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921228406424000