Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq13173 143 5e-29 >seq13173 Length=15772 Score = 143 bits (158), Expect = 5e-29 Identities = 298/435 (69%), Gaps = 14/435 (3%) Strand=Plus/Plus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| ||||||||||| || || ||||| ||||| || || |||| | || | Sbjct 14015 TGGCATTCTTCGCCGCATCAGATGGCATTGTCAACGAAAATCTGGTAGAACGCTTTAGCC 14074 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | ||||||||| ||||| || || || || |||||||| || ||||| ||||||| Sbjct 14075 AGGAGGTGCAGATAACCGAGGCACGTTGTTTTTATGGCTTCCAAATTGCCATGGAGAACG 14134 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCC-CGTCGAGCGT 42602 |||| || || ||||| | ||| || |||| || || | ||||| | || | || Sbjct 14135 TGCATTCGGAAATGTACAGCGTACTTATCGACACCTATATACGTGATCCTCATC-AACGC 14193 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCA-TCAAGAAGAAGGCGGACTGGGC 42661 || || ||||| || || ||||| ||| || ||| | ||| |||||||||||||| Sbjct 14194 GACTATCTTTTCAATGCGATTGAGACTATG-CCAGCAGTAAAGCGCAAGGCGGACTGGGC 14252 Query 42662 GCTCAACTGGA----TCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 ||| |||| | | |||| || | || || || | | |||| ||| Sbjct 14253 CCTCGCTTGGATTTCTTCAAAGTC----AGCCAATTTTGGTGAACGCATTATAGCTTTTG 14308 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG- 42776 |||||||||| ||||||||||| ||| |||||| || ||||| ||| | ||| || Sbjct 14309 CCGCCGTCGAAGGCATCTTCTTTAGTGGCAGCTTCGCTTCAATCTTTTGGTTGAAGAAGC 14368 Query 42777 AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 ||| | |||||||| || |||||||| || || | || | |||||||| || Sbjct 14369 GCGGTCT-TATGCCCGGTCTTACCTTCTCAAATGAGTTAATTTCACGCGACGAGGGTCTA 14427 Query 42837 CATAGGGACTTTGCC 42851 ||| | || |||||| Sbjct 14428 CATTGCGATTTTGCC 14442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943935494992000