Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq5260 102 7e-17
>seq5260
Length=19401
Score = 102 bits (112), Expect = 7e-17
Identities = 260/388 (67%), Gaps = 16/388 (4%)
Strand=Plus/Minus
Query 20204 TCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAA 20263
||||||| ||||| | ||| || || || | || ||||| |||||||| | ||| ||
Sbjct 12314 TCTCCCATGGTGTGCACAAAGTCGCCCGGCTTGAGGCCAGTCACATGAGCGATCATGTAG 12255
Query 20264 GTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTC 20323
|| | | | ||| |||||||||||| || || |||||||||||||| | |
Sbjct 12254 GTGAGCAACGCATACGAGGCAATGTTAAAGGGCACACCCAAACCCATGTCAGCGCTTCGT 12195
Query 20324 TGATACAGCTGACAGGAAAGCTC------ACCGTCAGCTACATAAAATTGACATAACAAG 20377
||||| | ||||||||| ||||| | | | | ||||| || || || ||
Sbjct 12194 TGATATAACTGACAGGACAGCTCGCCACGATCCTGGGACACATAGAACTGGGCGAAGCAG 12135
Query 20378 TGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATT 20437
|| || ||||| |||||||| | | || || ||||| ||| ||||||| ||
Sbjct 12134 TGGCAAGGCGGCAGCGCCATTTTTGGTATATCAATTGGATTCCAGGCAGACATAATAATC 12075
Query 20438 CTTCTATCGTGCGGATTATTTTTTAT----TAAATCCACAATGTACGACAATTGGTCAAA 20493
| || ||| ||||| || ||| | ||| ||| || ||| || || || |
Sbjct 12074 CGTCGATCTGATGGATTGTTGCGTATGGTGTCAAT-CAC-CTG-ACG-CAGCTGATCGAT 12019
Query 20494 CCCCTGGCCTGTATAGTCAGCATC-CGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACT 20552
|||| |||||||||||| | || | || | | || || |||||||| | ||| |
Sbjct 12018 GCCCTTGCCTGTATAGTCGTCGTCACAGGTGC-CATATTGTGCGCCAAAGTGGCGCCATT 11960
Query 20553 GGAAACCGTAAACAGGTCCCAAATCCCC 20580
| ||||| || || ||||||||||| ||
Sbjct 11959 GAAAACCATAGACGGGTCCCAAATCGCC 11932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441184113128000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |