Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq639 150 2e-31 >seq639 Length=19670 Score = 150 bits (166), Expect = 2e-31 Identities = 311/454 (69%), Gaps = 19/454 (4%) Strand=Plus/Minus Query 171728 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 171787 ||||||||||| || |||| ||| ||||| || ||||| || | ||||| ||||| | Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212 Query 171788 TCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCGGA 171847 ||| |||||| | |||||||| | || | ||||| |||||| ||| ||| Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152 Query 171848 TCAAAGATTTTACGAGCATCCTT---GGTGAGTTTTG--TGAAGATGTACCTCGT--TTG 171900 | | | || ||| | || || || | | |||| ||||| | | ||| Sbjct 1151 TTATAAAT-----GAGTCGCGTTAGCGGCGACATCAGGGTGAAAATGTAACGAGCACTTG 1097 Query 171901 AGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGAT 171959 |||| ||||| || || || ||||| ||||| ||||| | ||| || || |||| Sbjct 1096 ---CGCAATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGAT 1040 Query 171960 TGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAG 172018 |||||||||| || |||| | | | | |||||| || |||||||| || | ||| ||| Sbjct 1039 TGATATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTG-GAGAGAG 981 Query 172019 ACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTC 172078 || ||||||||||||||||||||| | ||||| || | ||| || ||| ||||| || Sbjct 980 ACCTCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTT 921 Query 172079 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 172138 | ||| |||| ||| | |||||| | |||||||||| | ||| ||||| Sbjct 920 ACTTCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTT 861 Query 172139 AGGCCGTCGGCCATGTGCGCGATGGAACGCTTCa 172172 || || || ||| | | |||||||| |||| Sbjct 860 AGACCATCCACCAGATTTGGTATGGAACG-TTCA 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597098231336000