Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq639 150 2e-31
>seq639
Length=19670
Score = 150 bits (166), Expect = 2e-31
Identities = 311/454 (69%), Gaps = 19/454 (4%)
Strand=Plus/Minus
Query 171728 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 171787
||||||||||| || |||| ||| ||||| || ||||| || | ||||| ||||| |
Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212
Query 171788 TCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCGGA 171847
||| |||||| | |||||||| | || | ||||| |||||| ||| |||
Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152
Query 171848 TCAAAGATTTTACGAGCATCCTT---GGTGAGTTTTG--TGAAGATGTACCTCGT--TTG 171900
| | | || ||| | || || || | | |||| ||||| | | |||
Sbjct 1151 TTATAAAT-----GAGTCGCGTTAGCGGCGACATCAGGGTGAAAATGTAACGAGCACTTG 1097
Query 171901 AGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGAT 171959
|||| ||||| || || || ||||| ||||| ||||| | ||| || || ||||
Sbjct 1096 ---CGCAATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGAT 1040
Query 171960 TGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAG 172018
|||||||||| || |||| | | | | |||||| || |||||||| || | ||| |||
Sbjct 1039 TGATATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTG-GAGAGAG 981
Query 172019 ACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTC 172078
|| ||||||||||||||||||||| | ||||| || | ||| || ||| ||||| ||
Sbjct 980 ACCTCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTT 921
Query 172079 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 172138
| ||| |||| ||| | |||||| | |||||||||| | ||| |||||
Sbjct 920 ACTTCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTT 861
Query 172139 AGGCCGTCGGCCATGTGCGCGATGGAACGCTTCa 172172
|| || || ||| | | |||||||| ||||
Sbjct 860 AGACCATCCACCAGATTTGGTATGGAACG-TTCA 828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597098231336000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |