Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 105 7e-18
seq2037 89.7 6e-13
seq20705 87.8 2e-12
seq8059 86.0 7e-12
seq21423 84.2 2e-11
seq16981 84.2 2e-11
seq4619 84.2 2e-11
seq21022 82.4 8e-11
seq17205 82.4 8e-11
seq15734 82.4 8e-11
seq200 82.4 8e-11
>seq30232
Length=15380
Score = 105 bits (116), Expect = 7e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||| | |||||||||||| ||| |||||| || || ||||| || | |||||| || |
Sbjct 15115 ACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCC 15174
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| |||||||| || | |||||||| || | || | || |||||
Sbjct 15175 GTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTT 15234
Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|| | ||| | || | || | || | | || || | ||||| |||| ||||
Sbjct 15235 GT-CTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGA 15293
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||| || | ||||| || ||||| |||||
Sbjct 15294 TGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
>seq2037
Length=2420
Score = 89.7 bits (98), Expect = 6e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
|| ||||| || | | ||| |||||||||||||||||||||||||||| ||||| |||
Sbjct 981 TTATCTCCCCGACGGGGAATTGAACCCTGGTCTCCCGCGTGACAGGCGGGGATACTAACC 922
Query 57063 ACTATACTACCGAGGAT 57079
||||||||| |||||||
Sbjct 921 ACTATACTATCGAGGAT 905
>seq20705
Length=54059
Score = 87.8 bits (96), Expect = 2e-12
Identities = 148/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
|||||| |||||||| ||| |||||||| ||||| || | |||||| || | || ||
Sbjct 6877 CACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTC 6936
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
| || || ||||| || || || || || || || | || | | ||| |||||| |
Sbjct 6937 CAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCC-T 6995
Query 42119 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
|| | || | ||||| | | | || || | ||| || || | |||||||| |
Sbjct 6996 GAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCT 7055
Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||||||||| ||||| || || || ||||||
Sbjct 7056 TGCCCGTTAGGGTCTTAACGAAAATCTGCATT 7087
>seq8059
Length=7765
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 6888 TTTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 6947
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 6948 CTATACTATCGAGGA 6962
>seq21423
Length=5018
Score = 84.2 bits (92), Expect = 2e-11
Identities = 69/83 (83%), Gaps = 2/83 (2%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 3323 TTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 3264
Query 57064 CTATACTACCGAGGA--TTGAAT 57084
|||||||| |||||| ||||||
Sbjct 3263 CTATACTATCGAGGATGTTGAAT 3241
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 3873 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 3932
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 3933 ATACTATCGAGGA 3945
>seq16981
Length=8162
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||
Sbjct 5031 TTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 4972
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 4971 ACTATACTATCGAGGA 4956
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062
||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||
Sbjct 5295 TTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACC 5236
Query 57063 ACTATACTACCGAGGA 57078
||||||||| ||||||
Sbjct 5235 ACTATACTATCGAGGA 5220
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 5886 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 5945
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 5946 ATACTATCGAGGA 5958
>seq4619
Length=19988
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 9339 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 9398
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 9399 TATACTATCGAGGA 9412
>seq21022
Length=1978
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1299 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1240
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 1239 TACTATCGAGGAT 1227
>seq17205
Length=2043
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
|| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||
Sbjct 438 TTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 497
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 498 CTATACTATCGAGGA 512
>seq15734
Length=4880
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 333 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 274
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 273 ATACTATCGAGGA 261
>seq200
Length=40443
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 24486 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 24545
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 24546 TACTATCGAGGAT 24558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542980576528000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |