Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 87.8 2e-12
seq20705 87.8 2e-12
>seq30232
Length=15380
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||||||| | || || || | | |||||||| || ||||||||||||
Sbjct 14875 GCCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGA 14934
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| ||| || |||||| || || || || | |||| | |||||| || || || ||
Sbjct 14935 CAAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 14994
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| || || | | || | ||| || | | ||||||
Sbjct 14995 AATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15054
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || || ||||||| || || || || ||||||||
Sbjct 15055 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || ||||| | | |||||||| || |||||||||||| |
Sbjct 15104 CCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 15163
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || |||||| || || || || | |||| | |||||| || || || ||
Sbjct 15164 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 15223
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| | || | |||| | || | ||| || | | ||||||
Sbjct 15224 ATGCCTTCCTTGTC-TTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15282
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | || || ||||||| || || || || ||||||||
Sbjct 15283 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
>seq20705
Length=54059
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| |||||||||||||||||| || ||| || || || | |||||| || | |
Sbjct 6893 GACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAATTGTTTGCCAGCA 6952
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539
|||| ||||| ||||| || ||||| || || |||||||| ||| | || | ||| |
Sbjct 6953 AAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTC-CTGAATCTTGGCTTTGAC 7011
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| ||| | || || | | || ||||| | || | || || || || || || ||
Sbjct 7012 ATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTT 7071
Query 138600 TACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 7072 AACGAAAATCTGCAT 7086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496050247824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |