Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq20705 113 3e-20 >seq20705 Length=54059 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 ||||| |||||||| |||||||| ||| ||| | | | ||||| |||||||||||| Sbjct 6890 GTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAATTGTTTGCCA 6949 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 || | |||| ||| ||||| || |||||||| || ||||| ||| ||| ||| Sbjct 6950 GCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTG 7009 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| |||| || ||||| | ||| || || | ||| ||||| || || || || || Sbjct 7010 ACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 7069 Query 15160 TTTACAAAAATTTGCAT 15176 || || ||||| ||||| Sbjct 7070 TTAACGAAAATCTGCAT 7086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357243034547000