Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq639 156 5e-33 >seq639 Length=19670 Score = 156 bits (172), Expect = 5e-33 Identities = 312/454 (69%), Gaps = 19/454 (4%) Strand=Plus/Minus Query 175748 CCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 175807 ||||||||||| || |||| ||| ||||| || ||||| || | ||||| ||||| | Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212 Query 175808 TCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCGGA 175867 ||| |||||| | |||||||| | || | ||||| |||||||||| ||| Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152 Query 175868 TCAAAGATTTTACGAGCATCCTT---GGTGAGTTTTG--TGAAGATGTACCTCGT--TTG 175920 | | | || ||| | || || || | | |||| ||||| | | ||| Sbjct 1151 TTATAAAT-----GAGTCGCGTTAGCGGCGACATCAGGGTGAAAATGTAACGAGCACTTG 1097 Query 175921 AGACGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGAT 175979 |||| ||||| || || || ||||| ||||| ||||| | ||||| || |||| Sbjct 1096 ---CGCAATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGAT 1040 Query 175980 TGATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGT-ATCCGCGAGGGAG 176038 |||||||||| ||||||| | | | ||||| || |||||||| || | ||| ||| Sbjct 1039 TGATATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTG-GAGAGAG 981 Query 176039 ACTTCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTC 176098 || ||||||||||||||||||||| | ||||| || | ||| || ||| ||||| || Sbjct 980 ACCTCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTT 921 Query 176099 ATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTG 176158 | ||| |||| ||| | |||||| | |||||||||| | ||| ||||| Sbjct 920 ACTTCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTT 861 Query 176159 AGGCCGTCGGCCATGTGTGCGATGGAACGCTTCA 176192 || || || ||| | || |||||||| |||| Sbjct 860 AGACCATCCACCAGATTTGGTATGGAACG-TTCA 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613244925672000