Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 127 2e-24
seq20705 89.7 6e-13
>seq30232
Length=15380
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 46376 AAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGC 46435
||||| | ||||| |||||||| |||||| ||||| ||||||||||| | ||||||
Sbjct 14885 AAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGT 14944
Query 46436 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCC 46495
|||| || ||||||||||| ||||| ||||| |||||||| || | || | || |||
Sbjct 14945 CCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCC 15004
Query 46496 TTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTG 46555
||||| |||||| ||| | || | | || || | ||||| || | |||
Sbjct 15005 TTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTG 15064
Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| ||||| |||| || || || ||||| |||||
Sbjct 15065 ATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Score = 123 bits (136), Expect = 3e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| |||||| || |||||| ||||| ||||||||||| |||||||| |
Sbjct 15115 ACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCC 15174
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || ||||||||||| ||||| ||||| |||||||| || | || | || |||||
Sbjct 15175 GTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTT 15234
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| ||| | || | | || || | ||||| || | |||||
Sbjct 15235 GTCTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGAT 15294
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| |||| || || || ||||| |||||
Sbjct 15295 GGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
>seq20705
Length=54059
Score = 89.7 bits (98), Expect = 6e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||||| ||||||||| ||| ||||| || ||||||||||| |||||||| | || ||
Sbjct 6877 CACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTC 6936
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
| || ||||| || || |||| || || || || | || | | ||| ||||||
Sbjct 6937 CAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTG 6996
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
||||| |||| | | | || || | ||| || || | |||||||| ||
Sbjct 6997 AATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTT 7056
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCAC 46600
|||||| || || ||||| || || |||||| || ||
Sbjct 7057 GCCCGTTAGGGTCTTAACGAAAATCTGCATTATGGAC 7093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564996760584000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |