Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 304 1e-77
seq30232 123 2e-23
seq20705 114 1e-20
>seq13173
Length=15772
Score = 304 bits (336), Expect = 1e-77
Identities = 508/722 (70%), Gaps = 12/722 (2%)
Strand=Plus/Minus
Query 132712 AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTA 132771
|| || || ||||| | ||||| || || || ||||||| ||||| || ||||||
Sbjct 14627 AGCTCTACCAGCAGACGATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTC 14568
Query 132772 AGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCG 132831
| || | | || |||| || || ||||| || || |||||| | || ||
Sbjct 14567 ATGCCAATTAAGTTTACGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCA 14508
Query 132832 TCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATC 132891
|| | | |||||| ||| ||| | || || ||||| |||| ||||| |||||||
Sbjct 14507 TCTGAAATGATTTCAATAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACATC 14448
Query 132892 AAGCAAG-CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950
| ||| | |||| |||||||| | |||||||| | ||||| | || || ||| ||
Sbjct 14447 A-GCACGGCAAAATCGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGT 14389
Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010
| |||||||| || ||||| || || | |||||| || | ||||| ||||| |||
Sbjct 14388 AAGACCGGGCATAAGACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAA 14329
Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT-CTTTGC 133069
||||| ||| |||||||| || ||||| | | ||| || || || ||||| |||||
Sbjct 14328 GAAGATGCCTTCGACGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGA 14269
Query 133070 TGGCGATCCA-GCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128
| ||||| ||| || ||||| || ||||| || || ||||| || || ||
Sbjct 14268 AGAA-ATCCAAGCG-AGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATC 14211
Query 133129 GCGTTCAACAAACGGAGTTTCTCTTCCGAGGA--ACGCACGTAGGTGTCGATGAGGGTCG 133186
|| || || | | ||| | | ||||| ||| | ||||||||||| ||
Sbjct 14210 GCATTGAAAAGAT--AGTCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGC 14153
Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246
||||||||||| || |||||||||||||| ||||| ||||| ||||| || || ||||
Sbjct 14152 TGTACATTTCCGAATGCACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCT 14093
Query 133247 CGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305
|| | |||||| || || || ||| || || ||||||||||||||||| ||||| ||
Sbjct 14092 CGGTTATCTGCACCTCCTG-GCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCT 14034
Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365
|||||||| || |||| ||| || || || || ||||| ||||| ||| |||
Sbjct 14033 GATGCGGCGAAGAATGCCAACACATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGA 13974
Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425
| ||| || | ||||||||||||| |||||||| ||||| ||||| || || || |||
Sbjct 13973 TTCCAATCTGTCATGTCCTTGGACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCG 13914
Query 133426 GC 133427
||
Sbjct 13913 GC 13912
>seq30232
Length=15380
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| |||||||| |||| || ||| || |
Sbjct 15102 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15043
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| | || |||| ||||| || || |||||| | || ||
Sbjct 15042 GATACCATTGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAG 14983
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| ||||| | ||||||||||
Sbjct 14982 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTTTGTCCGACTACAAC 14923
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| ||||| | || |||| |||||||| |||||| | || |||
Sbjct 14922 ATCCAGAAGGAGTCCACATTGCACTTGGTGCTCCGTTTGCGCGGTGGC 14875
Score = 120 bits (132), Expect = 3e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| |||||||| |||| || ||| || |
Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| | || || | ||||| || || |||||| | || ||
Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| |||||||| |||| ||||| || ||||||||||
Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 15151
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| ||||| | || ||||||||||||| |||
Sbjct 15150 ATCCAGAAGGAGTCCACTTTGCATTTGGTGCTCCGT 15115
>seq20705
Length=54059
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || || |||||||| ||||||||| | || ||||| | |
Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | ||| | |||| || || | ||||||||||||||||| | || ||
Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCA 6968
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || |||||||| |||| || | ||||| || |||||||||
Sbjct 6967 ACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAA 6908
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| ||||| || | || |||| |||||||| ||
Sbjct 6907 CATTCAAAAAGAGTCTACATTGCACTTGGTGCTCCG 6872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499958976128000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |