Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq2802 129 2e-24
seq14783 120 1e-21
seq20705 116 1e-20
seq4982 100 1e-15
>seq2802
Length=25935
Score = 129 bits (142), Expect = 2e-24
Identities = 250/366 (68%), Gaps = 6/366 (2%)
Strand=Plus/Plus
Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297
||||| ||||| |||||||| | ||||| | || ||||| ||||| || |||
Sbjct 20201 TTTGCCCCTGAGGAAATTTCTGCCATGGTGTTGGGCAAGATGAAGGAAACTGCCGAAGCC 20260
Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357
||| |||| ||| || |||| || | || || || || || ||||||||||||
Sbjct 20261 TATCTTGGCAAGAAAGTCACACATGCTGTCGTCACAGTCCCTGCCTACTTCAATGATGCA 20320
Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417
|| || ||||| || || ||||| || ||||||||| || | || | || || ||
Sbjct 20321 CAGCGTCAAGCTACCAAGGATGCCGGTGTCATTGCTGGTCTACAGGTGATGCGCATCATC 20380
Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477
|| ||||| || |||||||| | || ||||| || ||| || ||||| | ||
Sbjct 20381 AACGAACCCACTGCAGCTGCCATTGCCTATGGTCT-GGACAA--GAAAGA---GGGCGAG 20434
Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537
||||| | | || || ||||| || || || || ||| || | || |||||
Sbjct 20435 AAAAACGTGCTTGTGTTCGATTTGGGCGGCGGTACCTTCGATGTCTCCCTGCTGACAATT 20494
Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597
|| |||| || || || || || || ||||||||||||||| | || |||||||||
Sbjct 20495 GACAATGGTGTGTTCGAGGTGGTAGCCACTAATGGTGATACTCATTTGGGCGGTGAAGAT 20554
Query 451598 ATTGAT 451603
| |||
Sbjct 20555 TTCGAT 20560
>seq14783
Length=131557
Score = 120 bits (132), Expect = 1e-21
Identities = 132/176 (75%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333
|||||||| ||||| || || ||| || | | || |||| | |||||| | |||
Sbjct 77929 AAAATGAAGGAAACGGCTGAGGCGTATCTTAATACGCCCGTTAAGAACGCAGTAGTGACT 77870
Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393
|| || ||||| ||||| ||| ||||||| || ||||| || ||||| || || ||||||
Sbjct 77869 GTGCCTGCTTACTTCAACGATTCACAACGACAGGCAACAAAGGATGCTGGTCAAATTGCT 77810
Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
||||| ||||| | || ||||||||||||| ||||| || || | || |||||
Sbjct 77809 GGTTTGAATGTGTTGCGTGTTATTAATGAACCCACAGCGGCGGCGTTGGCCTATGG 77754
>seq20705
Length=54059
Score = 116 bits (128), Expect = 1e-20
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|||||| | ||||||||||| || || || || || || || || ||||| || ||| |
Sbjct 7089 ATAATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCT 7030
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|| |||| || ||| | | ||| || ||||| || || || ||||||||||| |||
Sbjct 7029 TCGGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGAT 6970
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226
||||||||| | || || | || |||||| | |||||||| | ||| || | || ||
Sbjct 6969 CAACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTAC 6910
Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGT 391258
|| ||| | || || | ||| | ||||| ||
Sbjct 6909 AACATTCAAAAAGAGTCTACATTGCACTTGGT 6878
>seq4982
Length=30196
Score = 100 bits (110), Expect = 1e-15
Identities = 178/260 (68%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
|| ||||| | ||| | || | || |||| ||||| || || || || || ||
Sbjct 20201 GGCAAGCCAAAGATTGAGGTTACATACAAAGATGAAAAGAAGACCTTCTTCCCCGAGGAG 20260
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||||||||||| || ||||| || || || || || | || |
Sbjct 20261 ATCTCCTCCATGGTTCTTACCAAGATGAAGGAGACTGCCGAGGCTTACCTGGGCAAGACG 20320
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| || |||| || || ||||| || ||||| ||||| ||| |||| || || || ||
Sbjct 20321 GTGACCAATGCCGTCATCACTGTGCCTGCTTACTTCAACGATTCACAGCGTCAGGCGACC 20380
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || || || ||||||||||| | || ||||| || || ||||| ||
Sbjct 20381 AAGGATGCTGGTACCATCGCCGGTTTAAATGTGTTGCGTATTATAAACGAGCCTACGGCC 20440
Query 451433 GCTGCTCTAGCATATGGACT 451452
||||| | || ||||| ||
Sbjct 20441 GCTGCCATTGCTTATGGTCT 20460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974852664893600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |