Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq639 136 5e-27 seq20705 111 2e-19 >seq639 Length=19670 Score = 136 bits (150), Expect = 5e-27 Identities = 196/274 (72%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 176020 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 176079 ||| ||||| || || ||||||||||||||||| | |||||| |||||||||||||| Sbjct 1092 ATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGATTGATATT 1033 Query 176080 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACC 176139 ||| || |||| | | | | ||||| || |||||||| ||||||||| ||||| Sbjct 1032 GTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTGGAGAGAGACCTCACC 973 Query 176140 GTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCATC 176199 ||| ||||| || | | || || || | ||| || ||| |||||||| | ||| Sbjct 972 GTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTTACTTCACG 913 Query 176200 CTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCATC 176259 |||| || | ||| || | | |||| |||||||| || ||||| |||||||| Sbjct 912 CTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTTAGACCATC 853 Query 176260 CGCCATGTGTGCGATAGAACGCTTCA-AGTCCGC 176292 | ||| | || || ||||| |||| |||||| Sbjct 852 CACCAGATTTGGTATGGAACG-TTCATTGTCCGC 820 >seq20705 Length=54059 Score = 111 bits (122), Expect = 2e-19 Identities = 572/899 (64%), Gaps = 19/899 (2%) Strand=Plus/Minus Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||| ||||| |||| ||| | ||||| |||||||| || |||||| | ||||| | | Sbjct 38624 CCGAGATCTTTTCTATGCTTTATGGATACCAGATCTTTTTATGAAGCGTGTTGAAGCTAA 38565 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 || ||||||| | | || ||| | || || || | |||| ||| || Sbjct 38564 TGAGGATTGGTCATTGATGTGCCCACATAAATGTCCTGGCTTACATGATGTTTGGGGAGA 38505 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCC 112264 |||||||| ||||| || || || | ||| | || || | | || | Sbjct 38504 AGAGTTTGATAAACTCTATGTCAAATATGAACAGGAAGGCCGTGCTAATCGAACAATTAA 38445 Query 112265 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATAT 112324 ||| | ||||| ||||| | |||||||| || |||||||| |||||||| Sbjct 38444 AGCGCAATCTCTGTGGTTTGCTATAATTGAGTCTCAAGTAGAAACTGGTACTCCATATAT 38385 Query 112325 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 112384 ||| | |||||| ||||||| | || ||||||||| | || | || || || | Sbjct 38384 GCTGTTCAAAGATTCCTGTAATCGCAAAAGTAATCAACAAAACGTTGGAACCATTAAATG 38325 Query 112385 TTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 112444 ||| | ||||| ||||| |||| | | | | | ||||| | ||||| || || Sbjct 38324 CAGCAATTTATGTACCGAAATTGTGGAGTATTCCGCCCCTGATGAAATTGCTGTTTGCAA 38265 Query 112445 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGA 112504 | | || || || || ||| | || ||| ||| || ||| | || || | | | Sbjct 38264 CTTAGCTTCCATAGCCCTCAATATGTTTGTCACTCCCGA---AAAAAAATACGACTTTAA 38208 Query 112505 AAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAA 112564 |||| | | || || || || | ||| ||||||||| | |||| | | ||||||| || Sbjct 38207 AAAATTGAAAGATGTAACAAAGATTGTTACAAAAAACTTGAACAAAATAATTGATATCAA 38148 Query 112565 TTTTTA-CCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCG 112623 ||||| || | ||| ||| ||||| || | || |||||||| ||||| | | Sbjct 38147 CTTTTATCCTCTACCAGA-GGCTAAAAAATCGAACTTAAGGCACCGTCCTATTGGAATTG 38089 Query 112624 GTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGT-CGCCACGCATTTGATTCCGACGAA 112682 |||| || || | || |||| | | | |||| | || | | | || ||| || Sbjct 38088 GTGTTCAGGGCTTTGCCGATGCACTGA-TCTTAATGCGGTATCCTTACGAAAGCGATGAG 38030 Query 112683 GCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGT 112742 || | || || || || |||||||| ||| | || || ||||| ||| Sbjct 38029 GCATCTCTTCTAAACCAGCAGATTTTCGAGACAATATATTTTGGAGCGCTCGAGGCAAGT 37970 Query 112743 TCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAA 112802 | ||| | ||| | | |||| || ||||| | ||| || |||| || Sbjct 37969 TGCGAGCTCGCACAAGAACATGGCTACTACGAAACATATGAAGGCAGCCCAGTGAGTAAA 37910 Query 112803 GGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCACTACGACTGGGACG 112860 || | | || | ||| |||| |||| | ||| || || | | |||||| | Sbjct 37909 GGTATTTTACAGTATGACATGT-GGAATAAAACTCCAACAGATTTA-TGGGACTGGAATA 37852 Query 112861 CTCTCAAGGAACG--CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCA 112916 | || || |||| || ||| | | || |||| | | ||||| | || |||||| Sbjct 37851 CACTTAA--AACGTCAATTAAGAAACACGGCGTTCGCA--ATTCTTTGCTTATTGCACCA 37796 Query 112917 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| ||||| ||||| || ||||| ||||||||||||||| ||| || || ||||| Sbjct 37795 ATGCCTACAGCATCCACTGCCCAAATAATGGGTAATAATGAATCCTTCGAGCCGTACAC 37737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620477032624000