Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq639 96.9 4e-15
>seq639
Length=19670
Score = 96.9 bits (106), Expect = 4e-15
Identities = 284/434 (65%), Gaps = 14/434 (3%)
Strand=Plus/Minus
Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350
|| || || || || |||| |||||||| || ||||| ||||| ||||| || || |
Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212
Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410
||| ||||| | |||||||| | ||| | ||| | ||||||||| | |||
Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152
Query 168411 TCAAAGATCTTGCGAGCCTCTTT---GGTAAGTTTTG--TGAAAATGTACCTCGTC--TG 168463
| | | || ||| | | || || | | | |||||||||| | | ||
Sbjct 1151 TTATAAAT-----GAGTCGCGTTAGCGGCGACATCAGGGTGAAAATGTAACGAGCACTTG 1097
Query 168464 AGAAGCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTT 168523
| | ||| ||||| || || ||||||||||| ||||| | ||| || ||||| ||
Sbjct 1096 CGCA--ATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGATT 1039
Query 168524 AATGTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATAC 168583
|| ||||| || ||| | | | | ||||| || |||||||| | || ||
Sbjct 1038 GATATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTGGAGAGAGAC 979
Query 168584 TTCACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCAT 168643
||||| || ||||| || ||| | ||||| || | ||| ||| || ||||| || |
Sbjct 978 CTCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTTAC 919
Query 168644 TTCATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAG 168703
|||| |||| || | |||||| | |||| || || | ||| ||||| ||
Sbjct 918 TTCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTTAG 859
Query 168704 ACCATCCGCCATAT 168717
||||||| ||| ||
Sbjct 858 ACCATCCACCAGAT 845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589728583208000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |