Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq639 96.9 4e-15 >seq639 Length=19670 Score = 96.9 bits (106), Expect = 4e-15 Identities = 284/434 (65%), Gaps = 14/434 (3%) Strand=Plus/Minus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTAAAAG 168350 || || || || || |||| |||||||| || ||||| ||||| ||||| || || | Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212 Query 168351 TCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAGGA 168410 ||| ||||| | |||||||| | ||| | ||| | ||||||||| | ||| Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152 Query 168411 TCAAAGATCTTGCGAGCCTCTTT---GGTAAGTTTTG--TGAAAATGTACCTCGTC--TG 168463 | | | || ||| | | || || | | | |||||||||| | | || Sbjct 1151 TTATAAAT-----GAGTCGCGTTAGCGGCGACATCAGGGTGAAAATGTAACGAGCACTTG 1097 Query 168464 AGAAGCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTT 168523 | | ||| ||||| || || ||||||||||| ||||| | ||| || ||||| || Sbjct 1096 CGCA--ATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGATT 1039 Query 168524 AATGTTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGGATAC 168583 || ||||| || ||| | | | | ||||| || |||||||| | || || Sbjct 1038 GATATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTGGAGAGAGAC 979 Query 168584 TTCACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCAT 168643 ||||| || ||||| || ||| | ||||| || | ||| ||| || ||||| || | Sbjct 978 CTCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTTAC 919 Query 168644 TTCATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAG 168703 |||| |||| || | |||||| | |||| || || | ||| ||||| || Sbjct 918 TTCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTTAG 859 Query 168704 ACCATCCGCCATAT 168717 ||||||| ||| || Sbjct 858 ACCATCCACCAGAT 845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589728583208000