Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq30232 141 2e-28 seq20705 141 2e-28 >seq30232 Length=15380 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||||||||| || || || ||||| |||| ||||| | || || || |||||||| || Sbjct 15133 AGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCC 15192 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 |||||||| | || || || ||||| ||||||||||| ||||||||||| || ||| Sbjct 15193 AGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGCCTT 15252 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 || ||||||||||| || || |||||||| || || | ||||| || ||||| || Sbjct 15253 AACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGT 15312 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 15313 CTTCACGAAGATCTGCAT 15330 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 |||||||| || || || ||||| |||| | ||| | || || || |||||||| || Sbjct 14906 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCCAGCTGCTTGCCA 14965 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | || || || ||||| ||||||||||| |||||||| || || ||| Sbjct 14966 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTA 15025 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || ||||||||||| || || |||||||| || || | ||||| || ||||| || Sbjct 15026 ACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTC 15085 Query 195124 TTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 15086 TTGACGAAGATCTGCAT 15102 >seq20705 Length=54059 Score = 141 bits (156), Expect = 2e-28 Identities = 154/203 (76%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || |||||||||||||| ||||| |||| ||||| | |||||||| | || || || Sbjct 6890 GTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAATTGTTTGCCA 6949 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 || ||||| || |||||||| ||||||||||| || |||||||| ||||| || ||| Sbjct 6950 GCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTG 7009 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || || || || || |||||| ||| || |||||||| | ||||| || || | || Sbjct 7010 ACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 7069 Query 195124 TTTACGAACACTTGCATTTATGG 195146 || ||||| | |||| |||||| Sbjct 7070 TTAACGAAAATCTGCA-TTATGG 7091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108995439031400