Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq13173 109 7e-19 >seq13173 Length=15772 Score = 109 bits (120), Expect = 7e-19 Identities = 449/701 (64%), Gaps = 8/701 (1%) Strand=Plus/Minus Query 37001 CAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAAT 37060 ||| || | ||| || |||||||| ||||||| | |||| |||| | || || ||||| Sbjct 14619 CAGCAGACGATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGCCAAT 14560 Query 37061 TAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAA 37119 || ||||| || | || ||| ||| ||| | | || | || | |||||||||| || Sbjct 14559 TAAGTTTACGGGCAAAGCGTCTGTGAGGAACTCCTGTT-CGATGACTACAGCATCTGAAA 14501 Query 37120 CTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATG 37179 || | || ||| ||| | | || | | | || | |||| | | || | Sbjct 14500 TGATTTCAATAATGCGTTCACGACTGGGACGTTGAACCAGATGCTGGAACA-TCAGCACG 14442 Query 37180 -CAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||||| ||||||| ||| || || | || || ||||| || ||||| | || Sbjct 14441 GCAAAATCGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAAGACCG 14382 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 ||||| | ||| | || || | |||||| |||| || || ||| |||||| || Sbjct 14381 GGCATAAGACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGAAGATG 14322 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA--ACTATAATCAGAAA 37356 ||||| || || ||||| |||| || ||| ||| ||| | | ||| | | ||||| Sbjct 14321 CCTTCGACGGCGGCAAAAGCTATAATGCGTTCACCAAAATTGGCTGACTTTGA--AGAAA 14264 Query 37357 TCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTA 37416 |||| | ||| || ||||| || || | || || ||||| || || | Sbjct 14263 TCCAAGCGAGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGCATTGA 14204 Query 37417 AGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTT 37476 | ||| ||| || | | ||| |||||| || || || |||| || ||||||| Sbjct 14203 AAAGATAGTCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGTACATTT 14144 Query 37477 CAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATT 37536 | || || | || || || || || || || ||||||||||| | || || | || | Sbjct 14143 CCGAATGCACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGGTTATCT 14084 Query 37537 GAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAA 37596 | || || | ||| | | | | ||||| || || || ||||| || || | Sbjct 14083 GCACCTCCTGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATGCGGCGA 14024 Query 37597 AGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCAT 37656 |||| || | |||| |||||| || | |||| | | | |||||||| Sbjct 14023 AGAATGCCAACACATGAGATATAAAGTGACGCTCATTGTCAGTCAGGCGATTCCAATCTG 13964 Query 37657 TAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | || || || || | ||| || || || || ||||| ||| Sbjct 13963 TCATGTCCTTGGACAGATCCACCTCTTCGACCGTCCAGAAA 13923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592063584568000