Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq10079 123 2e-23
seq30232 116 3e-21
>seq10079
Length=19992
Score = 123 bits (136), Expect = 2e-23
Identities = 200/286 (70%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710
|| |||||| ||||| || || | | | ||||| | ||||| || ||| |||| | |||
Sbjct 12667 ATCGAATTTGCGTTTGCACCCCTGATAGTTCATATAGCGTATCTTTCCAAAGATAGATCG 12726
Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770
||| ||||| | | || || || | || |||||||||||||| | || || ||
Sbjct 12727 TTCCTTCCAGCCTTGGTCATGCACCCCACCAATAGACCACATGCAACCCACGTAGCCATT 12786
Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTTGAAATATATGGCGTTGATT--AAAGCC 13828
||||| || |||||||| ||||| || ||||| | |||| || | | | ||
Sbjct 12787 AGGATCCCGCCCATCCAAGCTGTACTTATCGTTTAGCAATAT--TGTAAACTCCAGTGCT 12844
Query 13829 ACTGTAGGCGAAATAGACCATTCTAATAtttttttAGCCCAATATATTCTCATATATCCG 13888
|| || || | |||||| || || ||||| |||||||| |||| || | ||||
Sbjct 12845 TCTTCTGGTGAGGCGGTCCATTCCAAAATCTTTTTGGCCCAATACATTCGCAGAAATCCA 12904
Query 13889 TGCATTTTGCCTTGCGTTTTAAGCTGTGTCTGAGCAGCGTTCCACA 13934
||||||||||||| | || ||||| ||| |||| ||||||||
Sbjct 12905 TGCATTTTGCCTTCCTTTACCAGCTGCAACTGCGCAGAGTTCCACA 12950
Score = 87.8 bits (96), Expect = 1e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 13651 ATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTCGTATTTTACCATAGATTGGTCG 13710
|| |||||| ||||| || || | | | ||||| | ||||| || ||| |||| | |||
Sbjct 12469 ATCGAATTTGCGTTTGCACCCCTGATAGTTCATATAGCGTATCTTTCCAAAGATAGATCG 12528
Query 13711 CTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACCACATGCAACCGGCATAACCGTT 13770
||| ||||| | | || || || | || |||||||||||||| | || || ||
Sbjct 12529 TTCCTTCCAGCCTTGGTCATGCACCCCACCAATAGACCACATGCAACCCACGTAGCCATT 12588
Query 13771 GGGATCGCGTCCATCCAAACTGTATTTGTCGTT 13803
||||| || |||||||| ||||| || |||||
Sbjct 12589 AGGATCCCGCCCATCCAAGCTGTACTTATCGTT 12621
>seq30232
Length=15380
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | || || || || || || ||||| |||| | ||| | | || |||
Sbjct 15122 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCC 15181
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||| || || || ||||||||||| ||||| || ||||||||||| || ||||||
Sbjct 15182 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGA 15241
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | || || || | |||||||| ||||||| || |||
Sbjct 15242 ATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTG 15301
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || || || || ||||||||
Sbjct 15302 CCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Score = 109 bits (120), Expect = 4e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||| | || || || | || || || || || || ||||| |||| | ||| |
Sbjct 14885 AAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGT 14944
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
| || |||| ||||| || || || ||||||||||| ||||| || |||||||||||
Sbjct 14945 CCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCC 15004
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|| ||||| || || || ||| | || | || || || | |||||||| ||||||
Sbjct 15005 TTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTG 15064
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| || || || || || || ||||||||
Sbjct 15065 ATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396113226209400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |