Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 122 7e-23
>seq20705
Length=54059
Score = 122 bits (134), Expect = 7e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || || || || ||||||| || ||||| ||| || ||||||||
Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|| || | | || |||| || || | || |||||||||||| | || |||||
Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAGGGAATTCCTCCAGATC 6969
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731
|||| | || |||||||| |||||||||||||||||| | ||| || |||| || |
Sbjct 6968 AACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACA 6909
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGT 28762
||||||||||||| ||||| ||||| ||||
Sbjct 6908 ACATTCAAAAAGAGTCTACATTGCACTTGGT 6878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425227485961800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |