Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq639 105 8e-18
>seq639
Length=19670
Score = 105 bits (116), Expect = 8e-18
Identities = 286/434 (66%), Gaps = 14/434 (3%)
Strand=Plus/Plus
Query 14355 ATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGA 14414
|| ||| ||||||||| ||||| ||| | || || |||| | |||||| | |
Sbjct 845 ATCTGGTGGATGGTCTAAAGCCCGGCCAGCGCAAGGTCATGTTCACCTGCTTCAAGCGTA 904
Query 14415 ATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGT 14474
| |||| |||| | || ||||| || ||| ||| | || ||||| | ||| || |
Sbjct 905 ACGACAAGCGTGAAGTAAAAGTGGCTCAGCTGTCGGGTTCGGTTGCGGAAATGTCGGCCT 964
Query 14475 ACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGG 14534
|||| || ||||| || || | |||||||| || ||||| | | | | ||
Sbjct 965 ACCATCACGGTGAGGTCTCTCTCCAAATGACGATTGTAAACTTGGCCCAAAATTTCGTGG 1024
Query 14535 GTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTG 14594
| || ||||| || || ||||| || ||| | ||||| ||||||||||| || || |
Sbjct 1025 GCTCCAACAATATCAATCTTCTGGAGCCGCGCGGTCAGTTTGGTACGCGCCTTGCTGGCG 1084
Query 14595 GTAAGGATGCTTCTCA--GACGAGGTACATTTTCA--CAAAACTTACC---AAGGAGGCT 14647
|||| ||| | | || | | |||||||||| | | | || || | | ||
Sbjct 1085 GTAAAGAT--TGCGCAAGTGCTCGTTACATTTTCACCCTGATGTCGCCGCTAACGCGACT 1142
Query 14648 CGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGATGATGGACGC 14707
| || | | |||| | ||||||||| | ||| | ||| | ||||||||||
Sbjct 1143 C-----ATTTATAATCCACTGGATGACCCCTTGCTCCAGTACCAAGTGGATGATGGACAG 1197
Query 14708 TCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAG 14767
||||| ||| | || || |||||| |||| ||||| || |||||||| |||||
Sbjct 1198 AGGATTGAGCCATTGTGGTATATACCAACTATACCCATGGTGCTGGTGAATGGCGCCGAG 1257
Query 14768 GGTATCGGTACGGG 14781
|| || || || ||
Sbjct 1258 GGCATTGGCACAGG 1271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596314566496000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |