Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq639 105 8e-18 >seq639 Length=19670 Score = 105 bits (116), Expect = 8e-18 Identities = 286/434 (66%), Gaps = 14/434 (3%) Strand=Plus/Plus Query 14355 ATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATGCTTGCTTCCATAAGA 14414 || ||| ||||||||| ||||| ||| | || || |||| | |||||| | | Sbjct 845 ATCTGGTGGATGGTCTAAAGCCCGGCCAGCGCAAGGTCATGTTCACCTGCTTCAAGCGTA 904 Query 14415 ATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGT 14474 | |||| |||| | || ||||| || ||| ||| | || ||||| | ||| || | Sbjct 905 ACGACAAGCGTGAAGTAAAAGTGGCTCAGCTGTCGGGTTCGGTTGCGGAAATGTCGGCCT 964 Query 14475 ACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGG 14534 |||| || ||||| || || | |||||||| || ||||| | | | | || Sbjct 965 ACCATCACGGTGAGGTCTCTCTCCAAATGACGATTGTAAACTTGGCCCAAAATTTCGTGG 1024 Query 14535 GTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTG 14594 | || ||||| || || ||||| || ||| | ||||| ||||||||||| || || | Sbjct 1025 GCTCCAACAATATCAATCTTCTGGAGCCGCGCGGTCAGTTTGGTACGCGCCTTGCTGGCG 1084 Query 14595 GTAAGGATGCTTCTCA--GACGAGGTACATTTTCA--CAAAACTTACC---AAGGAGGCT 14647 |||| ||| | | || | | |||||||||| | | | || || | | || Sbjct 1085 GTAAAGAT--TGCGCAAGTGCTCGTTACATTTTCACCCTGATGTCGCCGCTAACGCGACT 1142 Query 14648 CGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGATGATGGACGC 14707 | || | | |||| | ||||||||| | ||| | ||| | |||||||||| Sbjct 1143 C-----ATTTATAATCCACTGGATGACCCCTTGCTCCAGTACCAAGTGGATGATGGACAG 1197 Query 14708 TCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAG 14767 ||||| ||| | || || |||||| |||| ||||| || |||||||| ||||| Sbjct 1198 AGGATTGAGCCATTGTGGTATATACCAACTATACCCATGGTGCTGGTGAATGGCGCCGAG 1257 Query 14768 GGTATCGGTACGGG 14781 || || || || || Sbjct 1258 GGCATTGGCACAGG 1271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596314566496000