Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 107 3e-18
>seq20705
Length=54059
Score = 107 bits (118), Expect = 3e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | || || | || || || || |||| |||||| ||| || || || ||
Sbjct 6859 ACCACCACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGA 6918
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| || || | || ||||||||||| |||||||| || | | ||||| || || ||
Sbjct 6919 CAGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGG 6978
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
||||| ||||| || || || || ||| ||||| || ||||| || | ||| ||
Sbjct 6979 AATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGAC 7038
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || || ||||| || || |||| || |||| ||| |||||||||
Sbjct 7039 CTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCATT 7087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 904749054360000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |